Gene Hneap_1786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_1786 
Symbol 
ID8534944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp1919785 
End bp1920363 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content58% 
IMG OID646384168 
Productelectron transport complex, RnfABCDGE type, B subunit 
Protein accessionYP_003263656 
Protein GI261856373 
COG category[C] Energy production and conversion 
COG ID[COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB 
TIGRFAM ID[TIGR01944] electron transport complex, RnfABCDGE type, B subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGACGG CCATCCTTGT GGCCGCGGGC TTAGCATTGG CCTTCGGTAT TGTGCTGGGC 
GTGGCAGCCC AGTGGTTTCA TGTGGAAGGC AACCCGCTGG CGGAGAAAAT CGATGCCATT
TTGCCGCAAA CCCAGTGCGG CCAATGCGGA TTTACCGGCT GCAAGCCCTA CGCCGAGGCC
ATTGCCAAAG GGGAGGCGGA TATTAATCAA TGTCCGCCCG GTGGCGAGAC GACCATCAAA
AATCTGGCCG ATCTGTTGGG TGTGGAGCCC AAGCCGCTCA ATGCCGAAAA TGGCGAAGCC
AAAGCCGTCC CGCTCCTTGC GGTGATTGAC GAGTCGGTCT GTATTGGTTG CACCAAATGC
ATTCAGGCCT GCCCTGTTGA TGCGATTTTG GGCGCGGCCA AGCAAATGCA CACGGTTATT
GCCGCCGAGT GCACGGGTTG TGAATTGTGT GTCGCACCGT GTCCGGTCGA TTGTATCGAC
ATGGTGCCGC TGGATGCTGG TTTGGCTGGC TTTCGCTTCC CCGAGCCAAA ACCATTGATC
ACCCAGCCCA CCAAATCGGC GGAATACGCG CATGTCTGA
 
Protein sequence
MLTAILVAAG LALAFGIVLG VAAQWFHVEG NPLAEKIDAI LPQTQCGQCG FTGCKPYAEA 
IAKGEADINQ CPPGGETTIK NLADLLGVEP KPLNAENGEA KAVPLLAVID ESVCIGCTKC
IQACPVDAIL GAAKQMHTVI AAECTGCELC VAPCPVDCID MVPLDAGLAG FRFPEPKPLI
TQPTKSAEYA HV