| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1784 |
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| Symbol | |
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| ID | 8534942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1917043 |
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| End bp | 1918092 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 646384166 |
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| Product | electron transport complex, RnfABCDGE type, D subunit |
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| Protein accession | YP_003263654 |
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| Protein GI | 261856371 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD |
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| TIGRFAM ID | [TIGR01946] electron transport complex, RnfABCDGE type, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTTT CTCCACAAAC CGCGCCGTTG CCCGAGGTGT CCAATAGCGT CCGCCGCGTC
ATGCTGACCG TGTTGCTGGC GATGTTGCCG GGTACCGCTG TCGCGATTGC CCTGTTGGGA
TGGGGAGTGT TGATCAACAT TCTGCTTGCT GTGATCGCTG GTTTGGTGGC GGAAGCGGCG
ATGTTGACCC TGCGTGCTCG CCCGGTTCGC CCAGCCATCG GTGATGGATC GGTCATCGTG
CTGGCTTGGA TTTTGGCGCT GTGCCTCCCC AACCTGGGGC CGTGGTGGTT GCCGGTATTC
GGCACCGTTT TTGCCGTGGT CGTCGCCAAG CAATTGTATG GCGGCCTGGG GTTCAACCTG
TTCAATCCGG CGATGGTCGG GTACGTCGTT TTGCTGATTT CGTTTCCAGA ACCCATGACG
CGCTGGGGGC CGGCTATCGA CAGCTCGGGC TCGGCGCTCA ACTTTATGCA GTCGCTTGCC
TGGTCCTTTT CTGGGGTGTT GCCCAATGGG GTGGGGTACG ATGGTCTTAG CGTCGCTACG
CCGCTTGATC ACGCGCGGGA ACAGCTTAGC ACCGGTGCCA CCATCCACAA CGTGACGCAA
AGCCTGTTCA GTGGGACTTC GTTGGCTCAG TCGTGGAATC TGTGGCTGAG TCTGGCGTTC
CTTGCCGGTG GCGCTTTTCT TTTATGGCGC GGCGTCATTC GCTGGCATAT TCCGGTGGCG
ATGATCACCG GTGTTCTTGT GATGTCCGGA TTCCTGTGGT TGCTGGATTC GGCGCGCCAC
GCCAGCCCAC TGTTTCATCT CATCACGGGG GCGACCGTGT TCGGTGCATT CTTCGTGGCA
ACCGATCCGG TGACGGCTTC GACGACACCA CGCGGCCGCC TGATTTTCGG CTTCGGTATC
GGCGTGTTGA CCGTGCTGAT TCGCAGCTTC GGCAGTTATC CGGATGGCGT TGCCTTTGCC
GTTTTGCTGA TGAACCTGTG CGTACCGCTG ATCGACTATT ACAGCCAGCC CAAGGTTTTC
GGCCATAAGA AGTCGGCGCC CATAAAATGA
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| Protein sequence | MKFSPQTAPL PEVSNSVRRV MLTVLLAMLP GTAVAIALLG WGVLINILLA VIAGLVAEAA
MLTLRARPVR PAIGDGSVIV LAWILALCLP NLGPWWLPVF GTVFAVVVAK QLYGGLGFNL
FNPAMVGYVV LLISFPEPMT RWGPAIDSSG SALNFMQSLA WSFSGVLPNG VGYDGLSVAT
PLDHAREQLS TGATIHNVTQ SLFSGTSLAQ SWNLWLSLAF LAGGAFLLWR GVIRWHIPVA
MITGVLVMSG FLWLLDSARH ASPLFHLITG ATVFGAFFVA TDPVTASTTP RGRLIFGFGI
GVLTVLIRSF GSYPDGVAFA VLLMNLCVPL IDYYSQPKVF GHKKSAPIK
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