Gene Hneap_1770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_1770 
Symbol 
ID8534928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp1905692 
End bp1906384 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content55% 
IMG OID646384152 
Productflagellar L-ring protein 
Protein accessionYP_003263640 
Protein GI261856357 
COG category[N] Cell motility 
COG ID[COG2063] Flagellar basal body L-ring protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCGAT ATCGAATTTT AGGTTTGGGT GTGATCGGCC TGAGTATCGT CGCCAGCTTG 
AGTGGCTGCG CAAGCCAACC GCCGATGAAG CCCGATCCGT CTTTTGCGGT CGTCATGCCG
CCGGAGGCGT CTACCAACAA TCCCATGCAG AATAACGGCT CGATCTACCA GTCCGGTCAG
ATGGATAACA TGTTTGTCGA CTCCCGACCC TATCGAGTGG GCGACATTTT GACGGTGGTG
CTGCAAGAGA GCATGAACGG CAGCAAGAGC GCCACGACCG GCACTAGCAA GGCCGATTCA
GTCGCGATCA CACCACCGGC CATCGGTGGG TTGTCTGCCA ACCTCATGAA TCGCTTTGGC
GCCTCGATTT CCACGGCCAA CCAATTCAAA GGCGATGGCA CAAGTGCACA AACCAACAGC
TTGAGAGGGC AGATTTCCGT GACGGTCGCG CGGGTCTATG CAAACGGCAG CTTGTTCGTG
CAAGGCCAGA AATACATCGG AATCAACCAG GGTACGGAAT ACGTGCGCTT ATCCGGATTG
GTTCGCCCGC AGGATATTGC GACGGATAAC ACCGTGCTCT CTACCCGGAT TGCCGATGCG
CATATTTCCT ACGGCGGAAC GGGCACCGTG AATGACGCCA ACAACATGGG CTGGCTGGCA
CGATTCTTCA ACAGCCCAAT TTTTCCTTTC TAA
 
Protein sequence
MNRYRILGLG VIGLSIVASL SGCASQPPMK PDPSFAVVMP PEASTNNPMQ NNGSIYQSGQ 
MDNMFVDSRP YRVGDILTVV LQESMNGSKS ATTGTSKADS VAITPPAIGG LSANLMNRFG
ASISTANQFK GDGTSAQTNS LRGQISVTVA RVYANGSLFV QGQKYIGINQ GTEYVRLSGL
VRPQDIATDN TVLSTRIADA HISYGGTGTV NDANNMGWLA RFFNSPIFPF