Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1759 |
Symbol | |
ID | 8534917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 1893050 |
End bp | 1894102 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 646384141 |
Product | signal peptide peptidase SppA, 36K type |
Protein accession | YP_003263629 |
Protein GI | 261856346 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.172005 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACCA CCCAGCCGCC AAATGATGAT CTGCGCATTG AACCCAATCT CGGTGCGGCA ACCGCACAAC ACACGAACGC GTCGGAAAAG ACGACAGCGG GAGACGATGC CTGGGCGCGC GAGGCGTTAC TCGATCTTGC CCGCCAAGGC CTGAAAGAAC AACGCAGCGC ACGCCGTTGG CGGGTATTTT TCCGGCTGAT CAGCCTCGCG TTGGTAATCT GGATCATTGC TTGGATCTCC CTCAGCGGCG ATCTCGATGA CGACCATGGT GTTGTTATCA AACAGCCATC GGCAGGCATC ATCGATATCA GCGGGGTGAT TGCCGCAGGG CAAGAAGCGT CCGCGGAGGA AATCATCCCC GTACTTGAAA AGGCGTTCAA GAACACCCAA ATCAAGGGCA TCGTTCTGCG CATGAACACG CCGGGCGGCA GCCCCGTTCA ATCTGGCGAA ATCTTTGACG CCATCATGCG ATTGCGCAAG GAATACCCTG CCAAGCCGGT TTATGCCGTC GTCGAGGATG TATGCGCTTC CGGTGGGTAT TACATAGCCG CCGCAGCCGA CAAAATTTTT GCAAATCAGG CCTCTCTCGT CGGTTCGATC GGCGTGCGGA TGGATAGCTT CGGGTTTGTG GACGCCATGC AGAAACTCGG CATCGAAAGC CGGCTGATTA CTTCGGGTGC CAATAAAGCG ATGCTCGACC CGTTCTCTCC CGAGAATCCA GCACAGGTGC AATACATGCA AAACCTGCTT GATCAGGTTC ACCAGCAGTT CATTGATGCC GTGAAAAAAG GCCGAGGCAA ACGACTCGCT AACGACCCCG ACCTGTTCTC CGGCCTGATC TACACCGGCG CACAGGCACA GAAGAACGGA CTGATCGACG GCCTGGGCAC GGTGCGTAGC GTGGTCCGAG ATGAGTTGCA CCTGAAAAAT GAAGTCGACC TTACGCCAAG CAAGAGCCCA TTTGAGGAGC TTCTGGGTAA AACCAGCACG CAAATCAGCC AGTCGCTGAC GAGCCTCTGG GCGGCAAATC TTGGTCCCAA GCTTTTACCC TAG
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Protein sequence | MSTTQPPNDD LRIEPNLGAA TAQHTNASEK TTAGDDAWAR EALLDLARQG LKEQRSARRW RVFFRLISLA LVIWIIAWIS LSGDLDDDHG VVIKQPSAGI IDISGVIAAG QEASAEEIIP VLEKAFKNTQ IKGIVLRMNT PGGSPVQSGE IFDAIMRLRK EYPAKPVYAV VEDVCASGGY YIAAAADKIF ANQASLVGSI GVRMDSFGFV DAMQKLGIES RLITSGANKA MLDPFSPENP AQVQYMQNLL DQVHQQFIDA VKKGRGKRLA NDPDLFSGLI YTGAQAQKNG LIDGLGTVRS VVRDELHLKN EVDLTPSKSP FEELLGKTST QISQSLTSLW AANLGPKLLP
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