Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1756 |
Symbol | |
ID | 8534914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 1887667 |
End bp | 1890717 |
Gene Length | 3051 bp |
Protein Length | 1016 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 646384138 |
Product | ribonuclease, Rne/Rng family |
Protein accession | YP_003263626 |
Protein GI | 261856343 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1530] Ribonucleases G and E |
TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000532878 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGAA TGCTAATCAA TGCCACCCAG GCCGAAGAGA TTCGGGTGGC GCTCGTCGAT GGACAGACGC TCTATGATAT CGACATAGAA ACGCCCGGCC ACGAGCAGAA AAAATCCAAC GTTTACAAAG CGTTAATTAC ACGCATTGAG CCGAGTCTCG AAGCGGTTTT CGTCAACTAC GGCGCAGACC GCCATGGTTT TTTGCCCTTC AAGGAAATTG CACGCAGCTA TTTTGATTCG GAGGCCGTCG ATGACAAGGG TCGCCCGATC ATCAAGTCGG CGCTGAAAGA AGGCCAGGAA ATCATCGTTC AGGTCGAGAA GGAAGAGCGC GGCAATAAAG GTGCCGCCCT CACTACGTTC GTCAGCCTGG CGGGACGATA CCTTGTTTTA ATGCCCAACA ACCCGCGGGC GGGCGGGGTT TCCCGTCGCA TCGAGGGCGA TGATCGCGCC GAGATCAAGG CGGCGCTGTC CGAGTTGGTC GTGCCCGAAG GCATGGGTCT GATCGTCCGC ACGGCAGGTG TCGGACGTGA ACCCGCCGAA CTGCAATCGG ATCTCGACTA CCTGCAACAG GTATGGGACG CCATTGTCAA AAAATCGGAA GCCCGCAAGG CCCCGTTCCT GATTTATCAG GAAAGCGACC TGATTATCCG TGCGCTGCGC GATTACATGC GCAACGACAT CGGCGAGGTG CTGATCGACG AGCCCAATAT GCATCAGCAG GCGCTGGATT TCGTCAATCT GGTGTCGCCG GATTCCGTGG ACAAGATTCG CCTCTACCAG GATCGTACCC CGTTATTCAC GCGTTACCAG ATCGAATCCC AGATCGAATC GGCCTACGAG CGGAATGTGA CCCTGCCTTC CGGCGGCGAG CTGGTATTCG ATGTGGCCGA GGCCCTGACG GCGGTCGACA TCAATTCCGG CCGCAGCACC AAAGGGCAGG ATATCGAAGA TACGGCCTTC AACACGAACC TTGAAGCAGC CGATGAGATC GCTCGTCAAC TGCGCCTACG GGACTTGGGC GGTCTGGTCG TCATCGATTT CATCGACATG GGGCAACCCA AACATCAACG GGAAGTAGAG AACCGCCTGC GCGATGCACT CAAGATGGAT CGTGCCCGGG TGCAACTGGG ACGAATTTCC CGTTTCGGCT TGCTCGAAAT GTCGCGTCAG CGGTTGTCCG CCTCTCTGGA AGAATCGGCG CAGCATGTGT GCCCGCGCTG CATGGGGCAG GGGCATATCC GTTCGGTTGA ATCCTTGGCG CTTTCGATCA TGCGCTTGAT GATCGATGAG TCCATGAAAG ATCAGACCGG TCGGGTCGTC GCTCAGGTGC CCGTCGATGT GGGCACCTAC CTGCTCAACG AAAAGCGCCT TCAGCTCCAC GAGATTGAGC AGAATCATCA GGTTGAGGTG TTGGTGATTC CCAACATCAA TCTGGAAACA CCACACTTTA AAATCGAACG CGTTCGTCGC TCTGATCTTG CCGAGTCGCC GGCCAATTCA CGTGCCCTTA TTGAACCGCT CGCCGTGGCC GTACCTGACC TGGAGCGTGC GCCGCGCCGT CCGGCGGCGC CGGTTGAACC GATTCGCCCC GTGCCGCAGT CTGCGCCTCG GCCCAAGGTT GTCGCCAGCG TCCCCGATGT GGCTACTGAA CCGGCGGCCA GCACGAGCGC AGCCAATATC GGTGCGTTGG GATTGCTCAA GCGCGTGATT GGTCAGATTT TCGGTGCCGG TGACAAGCGG GTTGAGGCGG AAGTGGCCGC TCCCCGTGAT CCGGCTAGGA AGGCATCATC GAATCGACCG CCGCGTGCGA AGGACGAGAA TCGGGCCACA CCGAATCGAT TACCTCGTGC CGCGACGCAA ACGAGCGAGT CAGAAGCAAG ACTAGAGGAT AAGCGCCGTG ATGAAGGCAA GGTAGAGGGC ACGAAACCAG AAGGTTCGAG CAACCGTCGT CGTCGTTCAC GCAGCAGAAA ACCAGCGGAA GGCCAAAGAG ATGCTCAGGT TAATACCGCC GCTTCGGCGA ATCAGCCTGC TGAAGCACCG GCTGTCACCA CGGATACTGC AGAGGGCAAG GGCTCAGCGA AAGCACCTGA AAAAACCACG GCCCGTCAAC GCGAGCCCCG CTCATCCGAG CCGGCCGTTC GTCCGATTGC CGCACACGAG CAAAGTCTGA TCGACCAGCA ACTCAAGGCG CCGGTGGCAT CACCTTCTGC CTTGCCTCTC AATGTTGCAG TCAAACGTGA TCCGGCTGCT GCATTGGCAC CAAACGCGGC ATTGGGATTG CTCGCGGATG ATGTGATCGT TCCCGCTCTT GTGGCTGCGG CCATAACGCC CAAGGCAGAA GCCCAGATTG CTGCACCTCA GCCCGAAGAT ACAGCGGCAA ACGAAGTGAA TGTGGCGCCT TCTGCTCCTA TGGTCGAATC GCAGGCCGAA GCACCGACGG ATACCACGAT TGCGGCAGTC ACCCCAGTCG TTGCAGAACC GGTATCCGCA GCGGAGCCTG TCATTCACAC GAAGGAAGAA ATGCCGTCAG TGGCCGCAAC CGAGTCGCCG GTTGAAACGT CCACGCTCAT CCCTGAAGCG ATAGCTGAAC AGATCGTTGC GCAGCCGGTA GAAGCAACGA ACGATTCTCC ATGGTCGCAA GCCAGTGCCA TACTGGCTGC CAAGCAAGAC GAGGTTGCTG CACCTGCCGC ATCAGAGACC AAAGTCGCCG ACGAACCGGT CTCTGAGAAA GCGCCGACAG ACGTGCAGCC GAATGCGTCG GCAGTCGACG AAGTTGAACC TCCGGTCGCT CAGGCCGAGT CGATCCATGA TTCTCCTGCT ATGGCGTCCG AACATGCGCC TGTGGCGGAG GCGATCATTG AATCTGCGCC CGTCGAATCT GAGCCTGTGG AAGCGGTTAC CGAAGCCGAG CAGCCGGAGG CGACGACAGC GGACGCTGTC ACTGAAGCGA CAACTCAGGT TGAAACAGCG CCTCAAGAAG ACGTTCATCC AGAAGCGATT GCAACGACAG ATTCTGCCGA AGAGACCGTT CGTAAGGAAC CAAATGCATA A
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Protein sequence | MKRMLINATQ AEEIRVALVD GQTLYDIDIE TPGHEQKKSN VYKALITRIE PSLEAVFVNY GADRHGFLPF KEIARSYFDS EAVDDKGRPI IKSALKEGQE IIVQVEKEER GNKGAALTTF VSLAGRYLVL MPNNPRAGGV SRRIEGDDRA EIKAALSELV VPEGMGLIVR TAGVGREPAE LQSDLDYLQQ VWDAIVKKSE ARKAPFLIYQ ESDLIIRALR DYMRNDIGEV LIDEPNMHQQ ALDFVNLVSP DSVDKIRLYQ DRTPLFTRYQ IESQIESAYE RNVTLPSGGE LVFDVAEALT AVDINSGRST KGQDIEDTAF NTNLEAADEI ARQLRLRDLG GLVVIDFIDM GQPKHQREVE NRLRDALKMD RARVQLGRIS RFGLLEMSRQ RLSASLEESA QHVCPRCMGQ GHIRSVESLA LSIMRLMIDE SMKDQTGRVV AQVPVDVGTY LLNEKRLQLH EIEQNHQVEV LVIPNINLET PHFKIERVRR SDLAESPANS RALIEPLAVA VPDLERAPRR PAAPVEPIRP VPQSAPRPKV VASVPDVATE PAASTSAANI GALGLLKRVI GQIFGAGDKR VEAEVAAPRD PARKASSNRP PRAKDENRAT PNRLPRAATQ TSESEARLED KRRDEGKVEG TKPEGSSNRR RRSRSRKPAE GQRDAQVNTA ASANQPAEAP AVTTDTAEGK GSAKAPEKTT ARQREPRSSE PAVRPIAAHE QSLIDQQLKA PVASPSALPL NVAVKRDPAA ALAPNAALGL LADDVIVPAL VAAAITPKAE AQIAAPQPED TAANEVNVAP SAPMVESQAE APTDTTIAAV TPVVAEPVSA AEPVIHTKEE MPSVAATESP VETSTLIPEA IAEQIVAQPV EATNDSPWSQ ASAILAAKQD EVAAPAASET KVADEPVSEK APTDVQPNAS AVDEVEPPVA QAESIHDSPA MASEHAPVAE AIIESAPVES EPVEAVTEAE QPEATTADAV TEATTQVETA PQEDVHPEAI ATTDSAEETV RKEPNA
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