| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1714 |
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| Symbol | |
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| ID | 8534872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1841339 |
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| End bp | 1843486 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 646384096 |
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| Product | FimV N-terminal domain protein |
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| Protein accession | YP_003263584 |
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| Protein GI | 261856301 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3170] Tfp pilus assembly protein FimV |
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| TIGRFAM ID | [TIGR03505] FimV N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGAAGT TGAGTTGGAT TATTGCCGGT ATTTTGTGTA GTGCCCCGGT TTTTGTTCAT
GCAGCGGAAC TCGGTGATGC CAAGATAGCC TCACATCTGA CCGAACGACT CGACGTTAAA
ATCCCGATTA CTGGGCTTAA TGGCGTGTCG CTCGATCAGG TCAAGGTGCG ACTGGCGCCT
GAGAAGTACT ATCAACAGGC TGGCTTGTCT CTTGATGGTC TGGCTGGAAA CATTACGTTT
CAGATCACTT CCGAAGGTAA GCGTAATTAC GTCATCGTCC GTTCCAAGCG GGCCATCTCC
AATCCGATCC TGAGTCTGCT GATCCAGATC AACGCTGGAG ATGGATCGCA GGTCAAGGAA
TTTGACTTTC TGCTTGATCC CCCGGTTCAC GCTGAACGCC GTGCAATGGC AGCATCCCAG
AATTCTTTCA CTGGCAATGT AGCCGAACCT GCTAAGACTA GCCGCCCCGT TCAGTCGACA
TCTTCGTGGA CACCCGTCGC CAATGTGCCG GACGTCAAGA TGGGCGGCAC CTACCATGTG
AAACGCGGCG ATACGCTCTA CGACATCGCC AAAACGGCGG TCGCCGACAA GTCGGTTCCT
GTACGTCCCA TGATGCAAGC CATCATCAAT GCCAACCCCA ACGCCTTTAT CGATGGTAAC
GGCAATTTGA TGAAAGCAGG CTCAAAGCTC AAAGTTCCAG AGCGCGCAGC GGTCGCTACA
GTTGCCGCAG CAACTGCCGC AACGGAAAAA GCCGCTGGTG TTCAAGCGCC GGAAGCAGCG
AGCACCGAAG CCAAGCCCAA ACTGCAACTG CTTGCCGTTG AGCCCGATAA GGAAAAAGCC
ACTGCTGCAA CCCCAGAGGC AGCCGCTCCA GCAGCGGGGA CAGTAACTGG AGGTGAGATG
ACTGGCGTGC TGCCAGCTAT CGATACTCCG GCCGCGCCGA CCGCCGATAC TATGCAGCAG
AACAATGAAG CCATTGCCTC CATCGATGCG AAAAGCGAGG TGATGAGCAA GCAGATTTCA
ATGTTGAATG ACCAGCTCAA ACAAGTTCAG GGCCTGGTTT CCGAGCGAAA TCAAAACATT
GAGCAGTTGC AGCAGAAGAT CAAGGAATCC AATGAGCAAA CCCAGTTGCT CAAGAAACAA
CTGGAAGCCC AGAACAATAA CTTCTGGTTG CAATGGGCAC CATATCTGAT GGGTGGGGTA
GGTCTGCTCA TCATCATCCT GTTGTTGGTG GCAATTTCAC GAGGTCGCAA GCGCGAACCC
GTTGAATCAA CCATTTACTC GACGACCGGG GCCGTTGCTG GTGCCGGTGC TCTGGCAACG
CAGCCTAAAG TCGAGATGGA GCCGCGCGTG GTTGCAGAGG TTGCGCCTAA GGCACCAACC
GTTCCTTCTG CCAGCGTCGT TGCAGATTCG AAGTCTGTTA TTGATGAAGC GCGATTACTC
ATCTCCTATA ACCTTCACAC GCAAGCTCAT GATCTGGTTG AAGACGCAAT AGCCCAGCAA
CCGAACGAAT TGTCGCTTTA TCAAGAGCTT GCAAGGATGT ATTCGGAAGC GAACAATACT
GCTGAGTTAG AAAAAGTATT GACGCGCATC GATGAAAAAT TCGGTCCAGA GCATCGCCCA
AACAATGAGG AGCTGGCGAT TTATTCCCCG GCGCCGACGA TGCTGGAAAT GGAAAGCGCA
GAAGCAGGCA CCGAGGTTTC TGCACCTGAC CAATCGGATG CGCTGGATGC CATTCCAGAT
AGCGCCTTTT CTTTCGATGC AGATTTGGAT TTGCCGAGCA AAGAGTCAGC TGATACATCG
TTGGACTTCG ATGAACCGAA TCAGGATTCC CCAGAAGTCG AGGCTGAGAG CGATCTTGAA
ATACTCTCGT TGGAGGGTGC TGAAGAGCCT GCTCCCACGC TTGACGACAT TGATCTTGAG
CTGGGTGATA ATACCCACGA GGTCCCTGAG ACAGTTGAGG AAGCCTTGCC AGATCTTGAG
CCTGAAGTTG AAACATCGGT TCAGGATGAT ACCCGCTTAG GCTTGGCCGA AGCCTTCCTC
GGCGTGGGTG ATCAGGAAAG CTACAAGATG ATTGCAGAAG AAATTGAATC GGAAGGCAAT
CCAGCCTTGA TAGCTGCCTT GAAGAAAATC GAACAGAAGT TCAGTTAA
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| Protein sequence | MRKLSWIIAG ILCSAPVFVH AAELGDAKIA SHLTERLDVK IPITGLNGVS LDQVKVRLAP
EKYYQQAGLS LDGLAGNITF QITSEGKRNY VIVRSKRAIS NPILSLLIQI NAGDGSQVKE
FDFLLDPPVH AERRAMAASQ NSFTGNVAEP AKTSRPVQST SSWTPVANVP DVKMGGTYHV
KRGDTLYDIA KTAVADKSVP VRPMMQAIIN ANPNAFIDGN GNLMKAGSKL KVPERAAVAT
VAAATAATEK AAGVQAPEAA STEAKPKLQL LAVEPDKEKA TAATPEAAAP AAGTVTGGEM
TGVLPAIDTP AAPTADTMQQ NNEAIASIDA KSEVMSKQIS MLNDQLKQVQ GLVSERNQNI
EQLQQKIKES NEQTQLLKKQ LEAQNNNFWL QWAPYLMGGV GLLIIILLLV AISRGRKREP
VESTIYSTTG AVAGAGALAT QPKVEMEPRV VAEVAPKAPT VPSASVVADS KSVIDEARLL
ISYNLHTQAH DLVEDAIAQQ PNELSLYQEL ARMYSEANNT AELEKVLTRI DEKFGPEHRP
NNEELAIYSP APTMLEMESA EAGTEVSAPD QSDALDAIPD SAFSFDADLD LPSKESADTS
LDFDEPNQDS PEVEAESDLE ILSLEGAEEP APTLDDIDLE LGDNTHEVPE TVEEALPDLE
PEVETSVQDD TRLGLAEAFL GVGDQESYKM IAEEIESEGN PALIAALKKI EQKFS
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