Gene Hneap_1662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_1662 
Symbol 
ID8534820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand+ 
Start bp1790286 
End bp1790894 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content49% 
IMG OID646384047 
Producttransglutaminase domain protein 
Protein accessionYP_003263535 
Protein GI261856252 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1305] Transglutaminase-like enzymes, putative cysteine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCACCAAT ATTTAGAGTC AACGGAGTAC ATAGACTGGA AGACACCAGC AGTGTTGGCC 
AAGGCAAAAT CACTGGCTGA TGGTGCTGAT TGTGTCGAGG TGATTGCCGA GAAGTGCTTT 
CTATTTGTCC GAGACAGAAT CGAGCATAGC TGGGACTACG AGCGTGATCC TGTTACATGT 
AAAGCCTCTG ATGTTCTGGA GCACGGAACA GGTTACTGCT ATGCGAAGAG TCATCTACTT 
GCGGCATTAC TGCGTGCGAA CGGTATTCCA GCCGGGCTGT GCTATCAGCG GTTGACCATT 
AGCAATGACA AGCCGCCATT TTGCCTGCAT GGGTTAAATG CCGTGTATTT AGAAGATCAT 
GGTTGGTATC GGATTGATGC CAGAGGAAAC AAAGAAGGGG TCTCGGCTGA TTTCTGTCCT 
CCGGTTGAAC GGTTGGCATT CCCAATAATC TCAGATGGAG AGGCTGATTT GCCAGAGATA 
TGGGCAAGCC CTATTGGGCC TGTTCTTGAG GTGCTTCTAA AAAGAAGTGC CTATAAGGAG 
GTGGCAGATA ATCTTCCGGA TATTCAGCTG GCTTTGGCTA ACAAGGCAAT GCACGCGACG 
AGCGCGTGA
 
Protein sequence
MHQYLESTEY IDWKTPAVLA KAKSLADGAD CVEVIAEKCF LFVRDRIEHS WDYERDPVTC 
KASDVLEHGT GYCYAKSHLL AALLRANGIP AGLCYQRLTI SNDKPPFCLH GLNAVYLEDH 
GWYRIDARGN KEGVSADFCP PVERLAFPII SDGEADLPEI WASPIGPVLE VLLKRSAYKE 
VADNLPDIQL ALANKAMHAT SA