Gene Hneap_1648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_1648 
Symbol 
ID8534806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp1778690 
End bp1779922 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content52% 
IMG OID646384033 
Productdomain of unknown function DUF1738 
Protein accessionYP_003263521 
Protein GI261856238 
COG category[L] Replication, recombination and repair 
COG ID[COG4227] Antirestriction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACCCA AAAAGCCTTT CCACGAAATC GTGGCTGAAA AACTGATAGA GCAATTAAAG 
CAGGGAACCG CGCCGTGGCA AAAGCCATGG CAACCGGGCG AGGCCGGTGG CATCGTGCCA
ATGAACCCCA CCACTGAGAA TCGCTACAAG GGCATTAATG CCATGTGGTT AATGGCACAA
GGCTACTCCG ATCAACGCTG GATGACCTAC AAGCAGGCCC AAGACATCGG CGCCCAAGTG
CGTAAAGGTG AGAAAGGCAC GGGCATTCAG TATTGGAAAT TTACTGAAGA GCAAATTTTA
CGCGATGACC ACGGCAAACC CGTGATCAAT GCCGAGGGCG ATAAGGTAAA ACAAACCGTC
AGGCTGGAAC GACCACGGGC ATTTTTCGCC ACCGTATTTA ATGCCGAACA GATCGATGGT
TTGCCGCCTT TGCAGCCAAA GGTTCAAATA GAGCAAACAT GGAAAGCACA GGAACGCGCC
GAAAATATTT TGGTTGCATC AGGTGCGGTG ATTCGTCATG GCGAAGCCGA TCGGGCTTTT
TATCGACCGG CAACCGACAG CATCCATCTT CCCAATAAGG GGCAATTCCC CAGCGCTGAT
AACTATTACG CCACAGCGTT GCATGAACTG GGGCACTGGA CGGGGCACAG CAGCCGTCTT
GATCGAGATT TGACTGGTGG TTTTGGCAGT GAGTCCTATG CCAAGGAAGA ACTGCGGGCT
GAAATTGCCA GCATGATTTT GGGCGATGAA CTGGGAATCG GGCACGATCC CGGTCAGCAT
GTGGCCTATG TCGGCTCATG GATCAAATCT TTGCAAGAAG ATCCTTTGGA AATATTCCGA
GCGGCTGCCG ATGCTGAAAA AATTCAAGGC TATGTTCTGG GCCTGGAACT GGCGCGTGAA
CAATCCTTGC AGCAAGAACC AACCCTTGAA CCGAAAATCC AGCAAATCGA AATCGATGGC
CAAAGTTACG CCGTCATTCA TGCAGATGAC TTGGTGCAGC AAAACCGTCG CTCCGTCATG
GGCAAGGTTC TGGCAATTGA GCCGGATGCC GTGTTTACTA AATTTGGTAA GGATGCCGGT
GGTCGCGAAC AGGTTGCCGT ACATAACCCA GCCAAGCTGG ACGCCATTCC GGCGCTGGGT
TCATTTGCGT CCATCAATTA CGGTGCCGAT GGTTTTGGTA AGCTGTCAGG CAATCAGCAC
AACAAAGCTT TAGAACAACA TATGGGGCGG TGA
 
Protein sequence
MEPKKPFHEI VAEKLIEQLK QGTAPWQKPW QPGEAGGIVP MNPTTENRYK GINAMWLMAQ 
GYSDQRWMTY KQAQDIGAQV RKGEKGTGIQ YWKFTEEQIL RDDHGKPVIN AEGDKVKQTV
RLERPRAFFA TVFNAEQIDG LPPLQPKVQI EQTWKAQERA ENILVASGAV IRHGEADRAF
YRPATDSIHL PNKGQFPSAD NYYATALHEL GHWTGHSSRL DRDLTGGFGS ESYAKEELRA
EIASMILGDE LGIGHDPGQH VAYVGSWIKS LQEDPLEIFR AAADAEKIQG YVLGLELARE
QSLQQEPTLE PKIQQIEIDG QSYAVIHADD LVQQNRRSVM GKVLAIEPDA VFTKFGKDAG
GREQVAVHNP AKLDAIPALG SFASINYGAD GFGKLSGNQH NKALEQHMGR