| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1616 |
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| Symbol | |
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| ID | 8534774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1755046 |
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| End bp | 1755798 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 646384003 |
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| Product | P-type conjugative transfer protein TrbJ |
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| Protein accession | YP_003263491 |
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| Protein GI | 261856208 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
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| TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACCCAA AACCCCGTGT CATTGCCTTT GCAATCGCAA CAGCCACTAT CGTCGCACTG
AATCTATCTA TGGCAAATGC CAGTGGAGTG GTTGCCGGAG CGACCGAGCC CACCCAAATC
ATGAACAACA TTGAACTGGT GGCGAGCAAT GTCAAAGAAG CTGAACAAAT CTCGAATCAG
CTGACGCAGA TAGCGAACCA AATTCAGGCT TACCAGAACA TGGTCACCAA TACCTTGAAT
ATCCCGAACC AGATTTGGCA AAACGCCGAC GGGTTATTGC AACAACTGGT TGGGGTGATC
AATCAAGGTC AGGCGCTGGC CTTTTCAGCC ACTAACATCA ACAGCCTGTT TCAGCAAAAA
TATCCTGGTT ACACGCCACC GCAGGACTTT GCTGCCTCTT ATCAGCAACT GAATGAAACA
ACCTTGGACA GCATCCGAGG GGCATTGAAT GCGGCCAATC TTCAGTCAAA CGAGTTTACT
TCGGAGCAGG GCGCTCTGAA TGCCATCGAG GCGCAGAGTC AAACCGCCCA AGGGCGGATG
CAGGCGATAC AGGCTGGCAA CCAGATTGCC ATGGCCCAAG TGCAGCAAAT GCGCAAGATG
CGCGCCTTGC AGATGGCGCA GATGCAGGCG CAGGCTGCAT ACATGGACGC GCAAACCCAG
CAGAAGGCCA ACGATGACAT GATCACACAG CAAACGCTTA ATTTCACCGT GACCCCAATG
GACACACGTT CTGCTCCACA AGTGGGTCAA TAA
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| Protein sequence | MNPKPRVIAF AIATATIVAL NLSMANASGV VAGATEPTQI MNNIELVASN VKEAEQISNQ
LTQIANQIQA YQNMVTNTLN IPNQIWQNAD GLLQQLVGVI NQGQALAFSA TNINSLFQQK
YPGYTPPQDF AASYQQLNET TLDSIRGALN AANLQSNEFT SEQGALNAIE AQSQTAQGRM
QAIQAGNQIA MAQVQQMRKM RALQMAQMQA QAAYMDAQTQ QKANDDMITQ QTLNFTVTPM
DTRSAPQVGQ
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