Gene Hneap_1609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_1609 
Symbol 
ID8534767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand- 
Start bp1748600 
End bp1749133 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content51% 
IMG OID646383996 
ProductLytic transglycosylase catalytic 
Protein accessionYP_003263484 
Protein GI261856201 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTTAC CAACGCTGTA TGCTCAATGT GCGCCCAGTG TGGCACCACA AACCCTAGCC 
GCCATCGTGC GGGTTGAGTC CGGTGGTAAT CCGTGGCGGA TCGGCATCAA TGGTGATTAT 
GTATTGCCAC AACAGCCTGC AAATCAGGCC GAGGCCATCC GTGATGCGAA CCGGCTGATC 
GGGATGGGAT ACAGCATCGA CATGGGCTTG ATGCAAGTCA ATTTGAAGAA CTTGAATGCG 
CTGAAACTGA GTGTCGAACA GGTGTTTGAT CCCTGCACCA ACATCAAAGC AGGTGCACAG 
ATATTGCAGA ATTTCTACCA AAAATCAGCA AGCGACATTG GCCAGGGGCA ACACGCACTT 
CGCCGCGCTA TTTCTGCATA CAACACTGGG AATTTCATCA ATGGTTTCAC GAACGGCTAT 
GTAGCCAAGG TCACCAAAGA GCGGCCTGTT CACGCTCAAT CTGATGAGCT GGTTTCAGCC 
ATGTTGGCCA AGACTTTGGT GGTTTGGTCA CCACTAAATG GAAATGAGTA TTGA
 
Protein sequence
MDLPTLYAQC APSVAPQTLA AIVRVESGGN PWRIGINGDY VLPQQPANQA EAIRDANRLI 
GMGYSIDMGL MQVNLKNLNA LKLSVEQVFD PCTNIKAGAQ ILQNFYQKSA SDIGQGQHAL 
RRAISAYNTG NFINGFTNGY VAKVTKERPV HAQSDELVSA MLAKTLVVWS PLNGNEY