Gene Hneap_1596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_1596 
Symbol 
ID8534754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp1737936 
End bp1738862 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content53% 
IMG OID646383985 
Producturea ABC transporter, permease protein UrtB 
Protein accessionYP_003263473 
Protein GI261856190 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID[TIGR03409] urea ABC transporter, permease protein UrtB 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGTTTG GATACTCATT CTCTGATTTA GGGTCCATCC TGGTGATGCA GGGGTTCTCC 
GGCTTAAGCC TCTTCAGCGT ACTGCTGTTG ATGGCCTTGG GTCTGGCGAT CATCTTCGGC
CAGATGGGCG TCATCAATAT GGCTCACGGA GAGTTCATGA CGATTGGGGC CTACTCAATC
TATGTCATCT CTAAAATTAC CGAACAGTAC TTTCCTGGAT TCATGGCTTA TTACTTCGTG
GTGGCGATCA TCGCTGCCTT TGTCATTGCC TTTACGGTGG GGTATTTCGT CGAATTCCTG
CTCATCCGTC ATTTATATAG GCGACCGCTT GATACGCTGT TAGCCACGTG GGGTCTCAGC
CTGATCATGC AGCAGATCTT CCGTTCGGTG TTTGGTGGCC GTGAGGTTAG CCCGACACTG
CCCGACTGGT TGATGGGGTC CTGGGCACCG ACGCCAAACA TTGATATTCC CATCAATGGC
CTCTTTGTGA TGCTCATCAC GCTCGTGGTT ACGGCAATCG TCATTCTCGC GCTTTATAAA
TCACGCTGGG GATTGAAGGT CCGCGCCACT ACACAGAACC GCATGATGGC CGGTGCAGTG
GGGATCAACA CTCAAAAGGT TGACCGCATG ACCTTTGCCG TTGGATGTGG TGTTGCGGGA
ATTGCCGGTG CGGCATTCAC GACGATTGCG TCAACTGGCC CGACCAGCGG ATCGACTTAT
ATCGTCGATA CGTTCCTGGT GGTTGTCTTC GGTGGGGCAG CCAGTCTGCT GGGTACGGTC
GCTTCCGCGT TCACCATTTC GCAGGCCCAG TCCATTCTTA CTTTCTTCAT GACGAACGCC
ATGGGCAAAG TGGTCACCCT GTTGGCGATC ATCGTCATTC TCATGCTTCG GCCCGAAGGT
CTGTTCTCAA GCAAGGTCAG AAAATAA
 
Protein sequence
MLFGYSFSDL GSILVMQGFS GLSLFSVLLL MALGLAIIFG QMGVINMAHG EFMTIGAYSI 
YVISKITEQY FPGFMAYYFV VAIIAAFVIA FTVGYFVEFL LIRHLYRRPL DTLLATWGLS
LIMQQIFRSV FGGREVSPTL PDWLMGSWAP TPNIDIPING LFVMLITLVV TAIVILALYK
SRWGLKVRAT TQNRMMAGAV GINTQKVDRM TFAVGCGVAG IAGAAFTTIA STGPTSGSTY
IVDTFLVVVF GGAASLLGTV ASAFTISQAQ SILTFFMTNA MGKVVTLLAI IVILMLRPEG
LFSSKVRK