| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1594 |
|---|
| Symbol | |
|---|
| ID | 8534752 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 1736031 |
|---|
| End bp | 1736774 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 646383983 |
|---|
| Product | urea ABC transporter, ATP-binding protein UrtD |
|---|
| Protein accession | YP_003263471 |
|---|
| Protein GI | 261856188 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4674] Uncharacterized ABC-type transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR03411] urea ABC transporter, ATP-binding protein UrtD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACA CCGATTTCGT GCTGGCTATC GAAGACCTGA CGGTATCTTT CGATGGATTC
AAGGCGGTCG ACGGCTTGAA TCTGTACGTG GACAAGAACG AGTTGCGGGT CGTGATCGGC
CCCAACGGGG CAGGGAAGAC CACCGTTCTG GACATGATCT GCGGCAAGAC CAAAGCTACC
TCCGGTTCCA TCAAGTTCAA GGGCATGGAA CTGACCAAAA TGGCCGAACA CCAGATTGTT
CGGGCTGGTG TCGGTCGTAA ATTCCAGACC CCTTCCATTT ATGAAAACCT GTCCGTTTTC
GAGAATCTGG AAATTTCGTT TCCAAGAGGC CGAACTGTCT TCGGCGCTCT GATGTTCAAG
CGCACGGCCG ATGTGGATCA ACGCATCCAC GAAGTGGCGG ACATGATTTA TCTCTCGGAC
CTGCTGGATA AGGAGGCTGG CCTTCTGAGC CATGGCCAAA AGCAATGGCT GGAGATCGGC
ATGTTGCTCA TTCAGGACCC TGAACTCCTG ATGCTGGACG AACCCGTCGC CGGCATGAGC
GTGCGGGAGC GCGAACAAAC CGCCGATTTG CTGAACCGGA TCTGCCAGGA CCGCTCGGTC
ATCGTGATCG AACACGACAT GGAATTCGTC AAACGCATTG CGCATAAGGT CACCGTACTT
CACCAAGGCA AGATCTTGTC ACAGGGAACC ATGGAACAGG TGCAGTCGGA TGAGCGCGTT
ATCGAAGTTT ATCTAGGCCA TTAA
|
|---|
| Protein sequence | MSNTDFVLAI EDLTVSFDGF KAVDGLNLYV DKNELRVVIG PNGAGKTTVL DMICGKTKAT
SGSIKFKGME LTKMAEHQIV RAGVGRKFQT PSIYENLSVF ENLEISFPRG RTVFGALMFK
RTADVDQRIH EVADMIYLSD LLDKEAGLLS HGQKQWLEIG MLLIQDPELL MLDEPVAGMS
VREREQTADL LNRICQDRSV IVIEHDMEFV KRIAHKVTVL HQGKILSQGT MEQVQSDERV
IEVYLGH
|
|---|
| |