| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1586 |
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| Symbol | |
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| ID | 8534744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 1724015 |
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| End bp | 1727551 |
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| Gene Length | 3537 bp |
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| Protein Length | 1178 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 646383975 |
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| Product | integral membrane sensor hybrid histidine kinase |
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| Protein accession | YP_003263463 |
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| Protein GI | 261856180 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.830805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGC TGCGCCGGAT TCCGAGCCTA GATGCCGTCC CGCCTCGACA GGTCAAGAAA
ATCCGGCGGG ACTATAAATC CTGGGTTGCC AATGAAACAC TCGAAGACTA CGCGCTTAGG
TACACTGCAC GTGAATTTCG CAAGTGGTCG ATCTTCCGCG TCGCCAACAC CGCGCTCGGT
GCCATTTCCT TTCTGGCACT GGAGGCCATC GGCGCAGCGC TGACCGTGGC ATATGGATTT
ATCAATACAT TCTGGGCCTG CCTTGCCGCC TCGATCCTGA TTTTTCTGAC CAGTCTGCCG
ATCGCGCACT ATGGCGCGAA ATACAACCTC GATATGGATC TGCTCACCCG TGGAGCGGGT
TTCGGTTACA TCGGCTCCAC CATCACGTCA CTTATCTACG CGTCATTCAC TTTCATATTC
TTTGCTATTG AAGCCGCCAT CATGGCGCAA GCGCTGAACC TGTATCTGGG CCTTCCGATG
ACACCCTCGT ATCTGTTCAG CGCCCTGATT GTCCTGCCAT TGGTCGGTTA CGGCATCACA
TTGATCAGCC GACTGCAGCT GTGGACCCAA CCCATTTGGC TAATCCTGTT GTTCCTGCCC
TACATCAGCA TCTTATGGAA AGATCCGACC ATTTTCGACC GACTCTTATC TTTTGGCGGT
AATCTCGGGA TACCCGAGTT CAATCTTCTG GCATTCGGCG CTGCCACCAG CGTGGTTCTG
GCCCTGATTG CACAAATCGG GGAACAGGTC GACTACCTCC GCTTCATGCC ACAAAAAGAT
AAATCCAATA AACACGCTTG GAATTTCGGA GTACTCCTGG CTGGTCCCGG CTGGATTATT
TTAGGCATGT TCAAACTTCT GGCCGGTGGT TTGCTGGCCT ATCTCGCGCT CAGCAGCGGG
ATCAGTCTGG CTCAAGCCGT TCAACCCGCA GTTTTTTATG AGCTCGGATT CAGTTATGTC
TTCAACTCAC CAGCAGTCGT GTTGTTCGCG GCAACCCTCT TCGTGGTGAT CTCCCAAATC
AAGATCAATG TCACCAATGC GTATGCGGGT TCGCTTGCGT GGTCGAATTT CTTCGCCCGC
CTGACGCATA GCCACCCGGG CCGAGTCGTC TGGCTTATAT TCAACGTACT GATTGCCGTG
ATGCTGATGG AATTCGGAGT TTTCGAGGCG CTGGGGAATG TGCTTGGCAT TTACTCGAAT
GTCGCGATCA GTTGGGTTGG TGCCATCGTT GCCGATCTGA TCATCAACAA GCCCCTCGGC
CTGAGCCCAC CGGGAATCGA GTTCAAACGT GCCTACCTTT ACGATATCAA TCCAGTTGGT
ATCGGCGCAT TGCTGATCGC CTCTACGCTG TCCATCATTG CGTTCAGTGG CTGGTTTGGG
CCTTGGGCCG AAGCTTTTTC TGCCTTCATT GCATTAGGCA GTGCCTTTAT CACGGCACCG
CTGATTGCCT GGCTGACCAA GGGCCGGTAT TACATCGCCC GCACAGCCGA TGAGTTGGGT
GATAAGAAGA TACTTCGGTG CGTTGTCTGC GAGAATGACT ACGAAACGGA AGACATGGCC
ATGTGCCCGG CCTATCGGGG AACCATCTGT TCGCTTTGCT GCACTCTGGA CGCGCGTTGC
CACGATATGT GTCGACCCAA GGCCGGCTTA CTGGAACAGT TCACCGCCAT GCTGAGTCGC
CTTCTGCCCA AGACCCTCGC AAGGCATATC AACACACGCA TTGGCTATTA CCTGCTGCTG
ATTCTGATTT CAGGACTGGC TTTGGGTACA ACACTGCTCT TTTTCTACTT GCAGCAACTC
AGCAGCATGC CCCCGGACGA CCTGGCGATT TTCAGGATGC TGCTGATCAA GCTTTTTGTC
GCCCTTTTCG CACTGACCGC TATTGGTGGC TGGTGGCTGG CGCTCACCCT GGAAAGCCGA
TACGTCGCTC AGGACGAGTC CAACCGACAG ACCCATCTAC TGATGAACGA AATCGAGGCG
CACCTGAAAA CCGATGTGCA ACTGCAGAAG GCCATCAAGG CCGCCGAGAG CGCCAACCAG
GCCAAAAGCC GCTATATGGC AGGGATCAGC CACGAACTTC GCACCCCGCT GAACTGTATT
CTGGGTTACG CCCAGATCGT TGAACACGAT CCCGCCGTAC CGCGACAACG CCGCGAGGAG
ATGAAGGTTA TCCGCCGCAG TGGAGAGCAC CTGATTTCGC TGATCAATGG CCTGCTGGAT
ATGGCAAAAA TCGAAGCAGG AAAACTAACC ATTGAACCCG AAGAGGTACA TTTCCCACAG
TTTGTCGCCC AATTGGCGGA CATGTTTCGG CTACAGGCTC AGGAGAAGCG CATCCAGTTC
AACTTCGAAG TGGTAGACGA ACTTCCACCC GTGGTGCGCG TCGACAAGAA ACGACTGGGG
CAAATCCTCA TCAATATTCT GGGCAACGCA ATCAAGTTCA CCGAACGAGG ACACGTGACC
TTCCGGATTT CTTACCGCAG CGAATTGGCG CGTTTTGAAA TCGAGGACAC GGGAATCGGC
ATTACAGAAA GTGATCGCAA GCGAATTTTC CTCCCCTTCG AACGCGGCAG TAATGCAACT
GGCAATGCCG CCAGCGCAGG CTTGGGCCTG ACAATCGCCA GTATGTTGGC CACGCTGATG
GGCGGTGAGT TGACTGTACA TGAGCGCGAG GGTGGGGGCA GCCGATTTCA GTTGCGTCTA
TTGTTGACCG CCGTTCGCAA CCCGCGTCCC CAACCCATGG ACACGCCGTC CAATATATTG
GGTTACCGCG GGCCGAAAAG GCGCATACTC ATCGTTGATG ACCAACAAAG CGATCGGGAA
TTTCTGCACA GCGTGCTTTC GGCTCTTGGA TTTTTTGTAA TTCAAGCAGA ATCGGGCATT
ACCGGCCTGC GTCAGGCCGC GGCACATCCA CCGGACTTGA TCATCTTGGA TATCAACATG
ACGGATATCG ATGGCTGGGA AACTGCACGA CTGCTACGCG CCAACGGCAT TTCCATGGCA
CCGATCCTGA TCGTCTCCGC CGACGTCCTC GACCGGGGCA AACCAAACAT GGAAGACATC
GGCATTGATG ACTTCATTGC CAAACCAGTC GAGATCCCTT TATTGCTACA GCGTATCCAC
GACAAACTGC ACCTCAACTG GATCACGAGT GGCCAGGAAC AATTAACCGC TCAGGCCACG
GCAACCCAGC AACAATTGGC GGAACCTGCC CCGAAAATTG CGCCCACGGC CCCCGCACCG
ACTTCGACGG ACCCAGCAGA TACGGCACCC GACGCAAACG TTGAGGGAGA GACGCTGGGC
GGCAGTAATC AACCAAACGT GGACGCCCTG CCCGATGCAG CCGCACTCAA CGCTCTGCGC
GAGCTGGGCA CAATGGGGTA CGTTCAGGGC ATTCTTGAAC AGCTCGACGA GTTGGAACAA
TTGCGCCCTG ATCTGGCGGA GATGGTCCGC CCACTGCGAA CCTCCATTCA ACAATTCCAC
CTCGGTGAGT ACATGCGACT ACTCAATCAA ATAGAAGCCA AGCATGAACC TACATAA
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| Protein sequence | MKKLRRIPSL DAVPPRQVKK IRRDYKSWVA NETLEDYALR YTAREFRKWS IFRVANTALG
AISFLALEAI GAALTVAYGF INTFWACLAA SILIFLTSLP IAHYGAKYNL DMDLLTRGAG
FGYIGSTITS LIYASFTFIF FAIEAAIMAQ ALNLYLGLPM TPSYLFSALI VLPLVGYGIT
LISRLQLWTQ PIWLILLFLP YISILWKDPT IFDRLLSFGG NLGIPEFNLL AFGAATSVVL
ALIAQIGEQV DYLRFMPQKD KSNKHAWNFG VLLAGPGWII LGMFKLLAGG LLAYLALSSG
ISLAQAVQPA VFYELGFSYV FNSPAVVLFA ATLFVVISQI KINVTNAYAG SLAWSNFFAR
LTHSHPGRVV WLIFNVLIAV MLMEFGVFEA LGNVLGIYSN VAISWVGAIV ADLIINKPLG
LSPPGIEFKR AYLYDINPVG IGALLIASTL SIIAFSGWFG PWAEAFSAFI ALGSAFITAP
LIAWLTKGRY YIARTADELG DKKILRCVVC ENDYETEDMA MCPAYRGTIC SLCCTLDARC
HDMCRPKAGL LEQFTAMLSR LLPKTLARHI NTRIGYYLLL ILISGLALGT TLLFFYLQQL
SSMPPDDLAI FRMLLIKLFV ALFALTAIGG WWLALTLESR YVAQDESNRQ THLLMNEIEA
HLKTDVQLQK AIKAAESANQ AKSRYMAGIS HELRTPLNCI LGYAQIVEHD PAVPRQRREE
MKVIRRSGEH LISLINGLLD MAKIEAGKLT IEPEEVHFPQ FVAQLADMFR LQAQEKRIQF
NFEVVDELPP VVRVDKKRLG QILINILGNA IKFTERGHVT FRISYRSELA RFEIEDTGIG
ITESDRKRIF LPFERGSNAT GNAASAGLGL TIASMLATLM GGELTVHERE GGGSRFQLRL
LLTAVRNPRP QPMDTPSNIL GYRGPKRRIL IVDDQQSDRE FLHSVLSALG FFVIQAESGI
TGLRQAAAHP PDLIILDINM TDIDGWETAR LLRANGISMA PILIVSADVL DRGKPNMEDI
GIDDFIAKPV EIPLLLQRIH DKLHLNWITS GQEQLTAQAT ATQQQLAEPA PKIAPTAPAP
TSTDPADTAP DANVEGETLG GSNQPNVDAL PDAAALNALR ELGTMGYVQG ILEQLDELEQ
LRPDLAEMVR PLRTSIQQFH LGEYMRLLNQ IEAKHEPT
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