| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1579 |
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| Symbol | |
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| ID | 8534737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 1716275 |
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| End bp | 1717972 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 646383968 |
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| Product | type IV-A pilus assembly ATPase PilB |
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| Protein accession | YP_003263456 |
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| Protein GI | 261856173 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCTC CCGCCATCAC TGGCCTATTG GCTGCACTCG TAAAAACCTC CGTCATTGAG
CCGCGACAAG CGACCGAGAT TCTCGAGAAG TCACGAGCCA GCAAAGAATC CATTATTCAG
ACGCTGATCA ACAGCGGGAT TTCTTCTGCC AAGATCGCCC AATCGGCATC AAAAAATTTC
GGTATCCCGC AGATCGACCT GGATGCATTC GACACCACCG ATTTGCCCAC ATCCATCGTT
CCCGCAAAAC TGCTTGAAAA TGGCAATGCC CTCCCCCTGC GCAAGCGAGG GCGCCGTCTT
ACGGTCGCCA TGGCCGATCC ATCGGATCTC GGCATTCTTG AGAATTACCG ATTCAGTACC
AACCTCACCA TTGACGTCGT CGTGGCCGAG GCGCAAAAAA TCACCCGATT GCTTGAAGAA
GCCAGCAGCA ACTCCATGGC TGATCTTGCC AATCTTGACG ATGATCTGGC TAATATCCAG
ATCGACGAGG GTGATATTGC GGGCGGGGAC GGTTCAAGCG AGGATAATCT TCAGGACGAT
ATTGTCGTCA AGTTCGTAAC CAAGGCATTA ACCGATGCGA TCCGACGCAA GGCTTCCGAC
ATTCACATCG AACCCTACGA AAAGATCTTT CGTATTCGAG TGCGTATCGA TGGCATTCTG
ACTGAAATCC CACCGCCCCC GCGACAACTG GCCGATCGTA TTGTTTCCCG CGTTAAGGTT
ATGAGTCGCA TGGATATTTC CGAACGACGC GTGCCACAGG ATGGTCGAAT CAAGCTCAAG
ATTTCCGCAG GACGCTCAAT CGATTTCCGG GTCAACTCGC TGCCGACCTT GTTCGGCGAA
AAAATCGTGC TGCGAATTCT CGATCCCACC AGCGCGCAAC TCGGTATTGA TTCGCTCGGA
TACGAAGAAG ACCAGAAAAA GCTTTACATG AAAGCGCTAG AACGTCCCTA TGGCATGATT
CTGGTTACCG GTCCTACCGG CTCCGGTAAG ACCGTGTCGC TGTATACGGG CTTGAATATC
CTCAACACCA TGGATCGGAA TATATCGACC GCGGAGGATC CTGCTGAAAT CGTGGTTCCC
GGCATCAATC AGGTCAATGT CAACGCCCGC GTCGGCCTCA CCTTCGCCAG CGCACTACGT
GCCTTCCTGC GTCAGGATCC CGATGTCATC ATGGTCGGCG AAATCCGGGA TCTCGAGACA
GCCGAAATCG CCATCAAAGC CGCTCAGACT GGTCACTTGG TGTTATCGAC GCTGCACACG
AACGATGCAC CCCAAACGCT GACCCGCTTA TTGAACATGG GTGTGCCGGG ATATAACATC
GCCTCATCAG TCAATCTGAT CATTGCCCAA CGACTGGCCA GGCGACTTTG CAACAACTGC
AAAAAAGTAG ATCATGTGCC GGACGAGGAG CTTGTGCGCG AGGGCTTCAA GCCCACCGAT
GTACAGGAGG GCTTCAAAAT TTTCAAAGCA GTAGGTTGTG ATCAGTGCAC TAATGGATAC
AAAGGCCGCG TCGGTATTTA TCAGGTGATG CCTGTCTCTG AGGAAATGGG ACGAATTATC
ATGCGTGGTG GTAATTCAAT GGAACTGGCG GAGCAGTCTG TCAAAGAAGG AATTAACGAT
TTACGGCAAT CCGGCTTACG CAAAGTAAAA GCCGGTGTCA CCAGCCTCGA AGAACTCAAT
CGGGTGACCA AGGATTAA
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| Protein sequence | MNPPAITGLL AALVKTSVIE PRQATEILEK SRASKESIIQ TLINSGISSA KIAQSASKNF
GIPQIDLDAF DTTDLPTSIV PAKLLENGNA LPLRKRGRRL TVAMADPSDL GILENYRFST
NLTIDVVVAE AQKITRLLEE ASSNSMADLA NLDDDLANIQ IDEGDIAGGD GSSEDNLQDD
IVVKFVTKAL TDAIRRKASD IHIEPYEKIF RIRVRIDGIL TEIPPPPRQL ADRIVSRVKV
MSRMDISERR VPQDGRIKLK ISAGRSIDFR VNSLPTLFGE KIVLRILDPT SAQLGIDSLG
YEEDQKKLYM KALERPYGMI LVTGPTGSGK TVSLYTGLNI LNTMDRNIST AEDPAEIVVP
GINQVNVNAR VGLTFASALR AFLRQDPDVI MVGEIRDLET AEIAIKAAQT GHLVLSTLHT
NDAPQTLTRL LNMGVPGYNI ASSVNLIIAQ RLARRLCNNC KKVDHVPDEE LVREGFKPTD
VQEGFKIFKA VGCDQCTNGY KGRVGIYQVM PVSEEMGRII MRGGNSMELA EQSVKEGIND
LRQSGLRKVK AGVTSLEELN RVTKD
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