| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1576 |
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| Symbol | |
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| ID | 8534734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1712672 |
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| End bp | 1714255 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 646383965 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_003263453 |
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| Protein GI | 261856170 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.725891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGACTC AGCCAAAAGA AAATCCCCCT GTGGTTAACA ATCAAAATTC CTCTTTAATT
ATTTTTGACA CGACCTTGCG TGATGGGGAG CAGAGCCCTG GCGCCGCAAT GACCCGTGAG
GACAAACTTC GTATCGCTCG CCAACTGGAG CGATTGGGCG TCGACGTCAT CGAGGCCGGC
TTTGCCGCCG CAAGTGAAGG TGATTTTGCG GCTATCCGCG CGATCGCCGA AACCATCGAA
AACTCAACGG TGTGTTCGCT TGCGCGTGCC AACGAGCGTG ATGTGCGTCG CGCTGGCGAG
GCTATCGCAC CGGCGGCCCG CAAGCGGATT CATACCTTTA TTGCGACCAG CCCCATCCAC
ATGGAGAAAA AGCTGCGCAT GACGCCGGAT GAGGTCGTCG ATCATGCAGT TAAAGCGGTC
AAGCTGGCCC GTACGTACAC CGACGATGTG GAATTTTCCG CTGAGGATGC GGTTCGTTCT
GAGATCGATT TTCTGGTGCG TATCTTCGAG GCGGCCATTG ACGCAGGCGC AACCACATTG
AATGTACCCG ATACTGTCGG TTACTCCACG CCAGCCGAAT GGGGCGCGCG CATGGCTGAG
TTGATTCGCC GCACACGCGG GTCGGATCGC GTGATCTGGT CCACGCATTG CCACAACGAT
CTCGGCATGG CGGTCGCCAA CTCGCTTTCT GCCGTATTGG CAGGCGCGCG TCAGGTTGAA
TGCACCATCA ATGGCTTGGG CGAGCGGGCG GGTAACGCCG CACTTGAAGA AGTGGTGATG
GCCGTTCGTA CACGTCAAGA TGTGTTCGGT CTCGACACCC GAATTGATGC GACCCAGATT
GTGCCAATCT CCAAACTGGT TTCCACCATC ACGGGCTATC CCGTGCAGCC GAACAAGGCC
ATTGTGGGCG CGAACGCTTT TGCCCATGAA TCCGGCATTC ATCAGGATGG TGTGCTCAAG
CATCGTGAAA CCTATGAAAT CATGCGTGCA GAAGACGTGG GCTGGACGAC CAACAAACTA
TCGTTGGGCA AGTTGTCCGG GCGCAACGCC TTCCGGAGTC GTTTGACCGA GCTCGGTATC
GATCTGGCCA GCGAAGAAGC CTTGAACGAT GCCTTCCGGC GATTCAAGGA TCTGGCCGAC
AAGAAGCGTG AAATTTTCGA CGAGGATATT CAGGCGCTTG TTTCTGAAGT GCACGAAGAG
CAGGTCGAGC AGCTCAAACT TGTTTCGCTG AAAGTGTGTT CGGAAACCGG CGAAGTGCCA
ATGGCCAACT TGGTGATTTC TGTGGCGGGC GAAGAGAAAT CGGCCACGGC ACAGGGTGCG
GGGCCAGTCG ATGCGGCATT TGTTTGTATC GAGAATATGA TGCAGTCGGG CGCTAATCTG
CAACTTTACT CCGTGAACAA CATCACCAGC GGTACCGATG CACAGGGCGA GGTAAATGTG
CGTCTTGAAC GCGCGGGCCG AATTGTAACG GGGCAAGGTG CCGATACCGA TATCGTGGTT
GCATCTGCCA AGGCCTATCT CAATGCGCTT GATCGCCTGC AAAAGCCTGC TGAACGCGCG
CACCCTCAAA TGGGCGACGT GTGA
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| Protein sequence | MMTQPKENPP VVNNQNSSLI IFDTTLRDGE QSPGAAMTRE DKLRIARQLE RLGVDVIEAG
FAAASEGDFA AIRAIAETIE NSTVCSLARA NERDVRRAGE AIAPAARKRI HTFIATSPIH
MEKKLRMTPD EVVDHAVKAV KLARTYTDDV EFSAEDAVRS EIDFLVRIFE AAIDAGATTL
NVPDTVGYST PAEWGARMAE LIRRTRGSDR VIWSTHCHND LGMAVANSLS AVLAGARQVE
CTINGLGERA GNAALEEVVM AVRTRQDVFG LDTRIDATQI VPISKLVSTI TGYPVQPNKA
IVGANAFAHE SGIHQDGVLK HRETYEIMRA EDVGWTTNKL SLGKLSGRNA FRSRLTELGI
DLASEEALND AFRRFKDLAD KKREIFDEDI QALVSEVHEE QVEQLKLVSL KVCSETGEVP
MANLVISVAG EEKSATAQGA GPVDAAFVCI ENMMQSGANL QLYSVNNITS GTDAQGEVNV
RLERAGRIVT GQGADTDIVV ASAKAYLNAL DRLQKPAERA HPQMGDV
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