| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1572 |
|---|
| Symbol | |
|---|
| ID | 8534730 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 1709954 |
|---|
| End bp | 1710754 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 646383961 |
|---|
| Product | hydroxyacylglutathione hydrolase |
|---|
| Protein accession | YP_003263449 |
|---|
| Protein GI | 261856166 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | [TIGR03413] hydroxyacylglutathione hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGGATTC ACGCAATTCC CGTCCTATCC GATAACTATG TCTGGCTGAT CGAAGGGGAT
CAAGGGCAGT GTGCCGTGGT CGATCCGGGC GAAGCCGCAC CGGTTCTGGC AGAAATCGAA
CGGCGTGACC TCACGCTTAA GGCTATTCTG CTGACGCATC ATCATGCCGA TCATTGCCAG
GGCGTCGCCG GATTGCGTGC TCGTTTCCCC GTGCCGGTTT ACGGCCCCGC TCTCGAAGCC
AAAACCTGGG TGACACATCC ATTGGCCAAT CTTGAAACCT TTGATTTGCC ACACATTGGT
CGATTCCAGG CTTGGCATAC ACCCGGTCAT ACCTTGGGGC ACATCAGCCT GATCTCTAAC
GGGGCCGCCT TTGTGGGCGA TACCCTTTTT TCAGCGGGCT GCGGGCGTTT GTTCGAGGGT
TCTCCCGAAC AGATGTTGGC GAGTCTGGAT CGTCTTTCGA GCTTGCCGGA CGCTACGATG
ATCTATTGTG GGCATGAATA TACCGCTGAT AGCCTGCGAT TTGCGCACTT CGCCGAACCA
AACAATGAAT CGATCATCCA ACGAATTCGC GAAGTGAACG AAGCCCGTGC GGCGGGCTTG
CCGAGCGTGC CAACCTCGAT GTCTCTGGAG AAACAAATCA ACCCGTTCCT GCGGATTCGT
GAACCATCCT TGCGGGCTGC GATTCTGAAA CATGCCCGAA GCGAATCGCT CAGCGATGCA
GATGCCTTTT GGACGCTACG TTGCTGGAAG GATGAGTTTG ATGATTTGCC GCTTCTTCCC
CGTCACGCAC AGAATCACTG A
|
|---|
| Protein sequence | MRIHAIPVLS DNYVWLIEGD QGQCAVVDPG EAAPVLAEIE RRDLTLKAIL LTHHHADHCQ
GVAGLRARFP VPVYGPALEA KTWVTHPLAN LETFDLPHIG RFQAWHTPGH TLGHISLISN
GAAFVGDTLF SAGCGRLFEG SPEQMLASLD RLSSLPDATM IYCGHEYTAD SLRFAHFAEP
NNESIIQRIR EVNEARAAGL PSVPTSMSLE KQINPFLRIR EPSLRAAILK HARSESLSDA
DAFWTLRCWK DEFDDLPLLP RHAQNH
|
|---|
| |