| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1571 |
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| Symbol | |
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| ID | 8534729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1708331 |
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| End bp | 1709950 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 646383960 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_003263448 |
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| Protein GI | 261856165 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1388] FOG: LysM repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.55441 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCATC CCGCTATGAT TTTCATGGGC AAATGGTTGG CGGGTTATCG CGCCGAACGG
CCGCAGCGAA GCATGTTGCT CCGTTTTCTC ATCCTCCTTG TTCTACCCGC TTTTCTCGCT
TTGAGTGGTT GTGCCAATTT ACCGCAAACA GCAGGTAATG CGCCGGTGGC GTCCAGTGCC
TTTGACGATG GCTCTTCTTC GGACAATGTG GATTACAGCA TTCTGCCCGC CATTAACACG
CCAGCGCAAA GTGCGCGAAA GGCGGCCTGG ATGAATGATG GCAACCTCTG GCACTATATC
GCGGCTCGAT TCACCCTGCC GATTCCCAAT AACCCTCGTG TTCAGCAACA ACTGGCCTTT
TATTCCAGCC ATATTGATTA CCTTGAGCGT GTCACTGAAC GTGCAAAGCC TTATTTGCAT
ATGATCGTGG CGGATTTGCA GGCCAATAAT CTCCCGCTGG AATTGGCCTT GTTGCCCATT
GTGGAGAGTG CGTACCGACC TGACGCCGTA TCAACTAGCA ACGCAGCGGG TATCTGGCAG
TTTGTTCGGA GCACGGGGGA TCATTTTGGT CTGCGGCGTA CGGTTTGGTA TGACGGCAGG
CGAGATATCA AGGCTTCGAC TGATGCCGCA ATGCAATATT TTACGCGTCT GCGGGTCATG
TTTAATGACA ATTGGCCCGT TGTTATCGCC TCCTACAACG GTGGTGAGGG CACGTTACAA
AATGCGATTA CGTACAACCA ATCCAAGGGG CTGCCAACCG ATTTCTGGGA TTTAACCCGA
ATCAGCAAAG AGACGGCTGA TTACCCCGCA CGGCTCTATG CGTTGGTGAT TATTTTCAGC
AATCCGCAGA AATACGGTTT CCACCCCTAT CCCATTCCGA ATCAGTCTGT TGTGACTGAA
ATCACGTTGA ATAAGTCGGT CAACCTGAAC AAGCTGGCTT CGCTGACAGG GGTGTCGCAT
GACGAGCTTT TTAATCTGAA CCCCGGCTTC GATAAATCGA TTACCGGACC GGAAACGACC
AACCTTCTGG TGCCCAAGAG TTTGGTATCA CAATTTACAA CGACGGCACT TGAAGAAGCC
GAGAAATCGG CCATGAACTG GGGGCGTTAT ACCCTTCGCC GAGGCGATAA TTTTCATAAG
CTGGCTTACC GTTACGGCTG TGACGTGGAT GAACTGCTCA AGGTTAATCG TTTGAGTTCG
GCCTATGCCC GTCCCGGAGA AACGATCATT GTTCCGTTCG GCCGCGGCAA GAAGCTGTTG
GCCAGTGGCG CAGATCAGCT CTATACGGTG CAAAGTGGGG ATTCATTGTG GGGCTTGGCC
CACCGGTTTG ATATGGATCT TGCCGACTTG AAGCGCATCA ATGGCCTAAA GGCCACAGAT
CCAATTCATC CGGGCCAGAA ATTGATCGTG GCTGCGAAAC AAGAACATCT GCGTACGGAC
GACATGCCGG TGAAAAGAAG TGGCGAGTCA TCGGGGCACT ATGTCGTTCA GAAGGGAGAT
ACCTTGTGGA ATGTGGCTCG GCGGTTTTCG ACGACCGTGA AACACCTGAT TGCTTCCAAC
CGACTTGATT CGTCAACTCC ACTCAAGCCC GGTCAGGTTT TGATGATTGC TGGAAACTAA
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| Protein sequence | MIHPAMIFMG KWLAGYRAER PQRSMLLRFL ILLVLPAFLA LSGCANLPQT AGNAPVASSA
FDDGSSSDNV DYSILPAINT PAQSARKAAW MNDGNLWHYI AARFTLPIPN NPRVQQQLAF
YSSHIDYLER VTERAKPYLH MIVADLQANN LPLELALLPI VESAYRPDAV STSNAAGIWQ
FVRSTGDHFG LRRTVWYDGR RDIKASTDAA MQYFTRLRVM FNDNWPVVIA SYNGGEGTLQ
NAITYNQSKG LPTDFWDLTR ISKETADYPA RLYALVIIFS NPQKYGFHPY PIPNQSVVTE
ITLNKSVNLN KLASLTGVSH DELFNLNPGF DKSITGPETT NLLVPKSLVS QFTTTALEEA
EKSAMNWGRY TLRRGDNFHK LAYRYGCDVD ELLKVNRLSS AYARPGETII VPFGRGKKLL
ASGADQLYTV QSGDSLWGLA HRFDMDLADL KRINGLKATD PIHPGQKLIV AAKQEHLRTD
DMPVKRSGES SGHYVVQKGD TLWNVARRFS TTVKHLIASN RLDSSTPLKP GQVLMIAGN
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