| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1554 |
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| Symbol | |
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| ID | 8534712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 1690979 |
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| End bp | 1692748 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 646383943 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_003263431 |
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| Protein GI | 261856148 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATCAC TTGAAACCAT CAAACTGCCC GACATCGGCG TGTCCGGCAA GGTCGAAATC
ATCGAAGTTC TGGTTGAAGC CGGGCAGATC GTCGAAGCCG AAACCTCGAT GCTCACGCTG
GAATCCGACA AGGCCACCAT GGAAATTCCG GCGCCCAAAT CCGGCAAGAT TGTCGAATTG
CTGATCAAGG TCGGAGATCA AGTCGGCACG GGCGACCCGA TCGCCACCAT GGAAGTCGCC
ACAGAATCCG CTGGCGAATC AGCCCCTGCG GCCGCAGAAC CGGCACCCGC CGCACCCAAG
GCCGAGGCGA CTGCCGCAAC GGCAACACCC GTCGCCGCAC CTGCCGATCT AAATGCAGAT
CATCAATGCG ACGTGGTGGT TCTGGGTGCA GGCCCCGGCG GTTATACCGC CGCGTTCCGT
GCAGCGGATC TGGGCAAGAA GGTCATCCTG ATCGAGCGCT TTGAAAAAAT TGGTGGCGTG
TGCCTGAACG TTGGCTGCAT CCCGTCCAAG GCCCTGCTGC ACGTATCCGG CATTCTCAAC
GAAACCCGCG AAATGGGCAG CCACGGCATT ACTTTTGCCG AGCCGAAAAT CGATCTTGAT
GGCCTGCGGG GCTTCAAGAA CGGCGTGATC GACAAGCTCA CCGGCGGCCT CAAGCAATTA
GCCAAACAGC GCAAGGTCAC CATCCTGCAC GGTGTCGGCC ACTTTGCCAG CGCCAACCAC
ATCCGCATTA CCGCAGCCGA TGGCAGCCAG AGTACCGTTC AATTCGAACA CGCCATCATT
GCCGCTGGCT CTCAGCCGGT AAAACTGCCC TTCATTCCGC ACGATGATCA CCGCGTTATC
GACTCGACCG GTGCGCTCGA ATTGGCGGAT ATCCCCAAGC GGATGCTGAT CATCGGTGGC
GGTATCATCG GTCTGGAAAT GGCGCAGGTC TATGCCTCAC TCGGGAGCAA GATCACCATT
GTCGAACTGG CGGACAACAT CATCCCCGGC GCGGATAAGG ATCTGGTTCG CCCGCTGCTC
AAAGACATCA AGAAGCGCTA CGAGAACATT TATCTCGGCA GCAAGGTCAC CGGTGTCACC
GCCACCGCCG ACGGCTTGGA TGTGACCTTT GAAGGCAAAT CCGCCCCGGC AACCGATCGT
TTCGACAGGA TTCTGGTCGC TGTCGGCCGC GCGCCAAACG GTCGCAAGCT CAATCTGGAA
GCGGCCGGTG TCACCGTCGA TCAGCGCGGC TTCATCCCCG TAGACGCGCG GATGCAGACC
AATGTGCCGC ACATCTTCGC CATTGGCGAC ATCGTCGGCC AACCCATGCT GGCCCACAAG
GCTGTGCATG AAGGCAAAGT CGCCGCGGAA GTCATCTGCG GCATGAAATC CGCCTTCACG
CCGATCACCA TCCCGAGCGT GGCCTACACC GACCCGGAAA TTGCGTGGGC TGGCAAAACC
GAAGATCAAC TCAAGGAAGA AGGCATTGCC TATGAAAAAG GTGCCTTTCC GTGGGCGGCA
TCTGGCCGAT CGCTCAGCAT CGGTCGAGAT GAAGGCCTGA CCAAGGCGCT GTTCTGTGCA
GAAACCCACC GCCTGCTCGG CGTCGGCATC GTCGGCCCGA ACGCAGGTGA GCTGATTGCC
GAAGCCGTAC TCGCCATGGA AATGGGCGCC GACATGAGTG ATATCGCCCT AACCATCCAC
CCCCACCCGA CGCTCTCGGA AACCCTGGGC TTCGCAGCGG AAATGGCCGA AGGTACGATT
ACAGATTTAC TGCCGCCCAA AAAACGGTAG
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| Protein sequence | MASLETIKLP DIGVSGKVEI IEVLVEAGQI VEAETSMLTL ESDKATMEIP APKSGKIVEL
LIKVGDQVGT GDPIATMEVA TESAGESAPA AAEPAPAAPK AEATAATATP VAAPADLNAD
HQCDVVVLGA GPGGYTAAFR AADLGKKVIL IERFEKIGGV CLNVGCIPSK ALLHVSGILN
ETREMGSHGI TFAEPKIDLD GLRGFKNGVI DKLTGGLKQL AKQRKVTILH GVGHFASANH
IRITAADGSQ STVQFEHAII AAGSQPVKLP FIPHDDHRVI DSTGALELAD IPKRMLIIGG
GIIGLEMAQV YASLGSKITI VELADNIIPG ADKDLVRPLL KDIKKRYENI YLGSKVTGVT
ATADGLDVTF EGKSAPATDR FDRILVAVGR APNGRKLNLE AAGVTVDQRG FIPVDARMQT
NVPHIFAIGD IVGQPMLAHK AVHEGKVAAE VICGMKSAFT PITIPSVAYT DPEIAWAGKT
EDQLKEEGIA YEKGAFPWAA SGRSLSIGRD EGLTKALFCA ETHRLLGVGI VGPNAGELIA
EAVLAMEMGA DMSDIALTIH PHPTLSETLG FAAEMAEGTI TDLLPPKKR
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