Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1543 |
Symbol | |
ID | 8534701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 1678055 |
End bp | 1678693 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 646383932 |
Product | methyltransferase |
Protein accession | YP_003263420 |
Protein GI | 261856137 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0742] N6-adenine-specific methylase |
TIGRFAM ID | [TIGR00095] RNA methyltransferase, RsmD family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAATCCT CACCTCGCTC CTTATCCGGC CAGACTGTAC GTGGCAAACA GGTCGTGCGC GTGACGGGTG GGACGATGCG CTCTCAGCGT TTGCATTTTC CTGCCATGCC GGGCTTGCGC CCCACGCCCG ACCGGGTGCG AGAAACGCTG TTCAACTGGC TGGGGCAAAA TCTCGATGGC TGGCGGGTGC TGGATTTGTT CGCTGGTAGC GGCATTCTCG GTATCGAATC CCTTTCGCGA GGTGCGCAGT GGGTGGGTTT GATCGAGCAA TCGGCACGCG TTGCCGCCGA GATTCGCAAC AGTTTGAAAA CAATGTCGGT AGCAGATGAT CGGGCACGGG TTTGGTCGCA GGATGCATTG GGTTGGCTGC GTCAGGCCCC GAATCAATTC GTATCGGGGG AGCGGATCGA TCTGGTATTT CTTGATCCAC CGTTTGCGCG TCTCGACTTG TTGTCACAAG CGGTTGAGCG CTTGCAGCAG GCCGATTGGC TGGCGGATGA CGCGTATTTA TATATCGAGC AAAGTGCCCA AGAGGCGAGC GTTCAACCCG TGGGTTGGGT CAGGTTGCGC GAAGGTCGAG CCGGAGAGAG TGCGTTTGCG CTATGGCAGC GGGAAAGGGC ACCGTCGGCA AGCGAGTAG
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Protein sequence | MKSSPRSLSG QTVRGKQVVR VTGGTMRSQR LHFPAMPGLR PTPDRVRETL FNWLGQNLDG WRVLDLFAGS GILGIESLSR GAQWVGLIEQ SARVAAEIRN SLKTMSVADD RARVWSQDAL GWLRQAPNQF VSGERIDLVF LDPPFARLDL LSQAVERLQQ ADWLADDAYL YIEQSAQEAS VQPVGWVRLR EGRAGESAFA LWQRERAPSA SE
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