Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1524 |
Symbol | |
ID | 8534682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 1656926 |
End bp | 1658548 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 646383914 |
Product | glycosyl transferase family 39 |
Protein accession | YP_003263402 |
Protein GI | 261856119 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACGC CCTCAGCCCC CCACTGGACC GCCCGCCTCG CTCGTTTAGG TCAATGGCTG CTCGATCACC CCGTTTGGCT CTTTGTATTA TTTGCGTTTT GGTTAGCGGC AACGATCGGT TTGCGACCTT TGTTCGTACC GGATGAAGGC CGTTATGTGG GCGTTGCCCT GTCGATGCTG CACACCGGCG ACTGGCTGGT GCCGAAACTT GACGGCCTGC CATTTTTCCA CAAACCACCC TTATTTTACT GGGTCACCGC GTCGTCGCTG GCTGTGTTCG GCACGCACGA ATGGGCAGCC CGCGCGGCAC CATTTCTGGC GGGCATGGCC TCGGCCATTA CCTTGTTCTG GTTTTTGAAC CAATACGCCA ACCGCCGTGC GGCCGGTTTG GGTGTGTTGT TGCTCGGCAC TTTTCCGTTG TTTTTCGATG CGGCGCAATT TGCGAGCATG GACATGCTGG TCGGCTCATT AATTGCCATC ACCATCCTGC TGCTGGCCCA TGTAAGCCAG CAATTGCAGG CGAGACGAAG TGCCAAATGG GTGCTGGTTC TGGCCTATGC CACGGCAGGG CTTGGCATGA TGACCAAGGG CATGATCGGG TTTGTCCTGC CCGGCATGGT TATTACCTTT TGGCTCCTGT GGAACCGACG ATTCACCCAT CTTTACAGGC TGATTTCTCC GCTTGGTTTG GTCGTTTTTT TGGCGATTGT GGCGCCCTGG TTTGCTCTGA TGGAACTCAA GTTCCCGGGC TTTTTGCACT ACACCTTCAT CTACCAGCAG TTTGATCGCT ATCTCGACAG CAGTTTTAAC AATCCGCAAC CGATTTATTT TTACGTCATG GTGTTGTTCG GCGGCCTGAT TCCCTGGGCG GTCGGTCTGT TCTGGCTGGC CTCGTTCCCG AAAAATCGTC AGCTCATGTC GTTGAAGCGC ACCAATCATC TGCTGAGCCT TGGGGTGATC TGGCTCGGCA GCATTTTGTT GTTCTTCTCG ATCCCGACCT CAAAACTGAT CGGGTATATT TTGCCGACGG TGCCGAGTCT TGCCCTATTG TTGGCCTTGG CATTCGACAA AGCCCTCACC CACACCGCGA ATGAACCGGC CGAGCAGCGC CGTTGGCAGG GGCGCATCGC GTCTATGGCC CTGATCGGTG CGCTGTTGGG CGTAACGAGC GTCGTCATTT TCGCCGTGAT AGATCACAAA TCGCATAAGG AAATCACCCT GGCCGTGCGT GACCGCATCG CACCCGATGC CGATGTGGTG TTTTACAACT ATTACTATTT CAGCGTGCCG TTTTATCTGG ATCGCACCCA GCCAGCCCTG GTAACAGGCC CGTGGGATGA CCCGAATAAT TTCAGATCCG ATGGTGCCAA TACCGAGCTG TACACGTCGG CGAAGTTCGA TCCCGAAGCC GCCAAGCGCA TTTTGATTTC CACGGATCAA CTCGGCGCCA TGGCCACCGA AGCCAAGCAA GGAAAACGCG CACCGGTATG GGTATTCGTT CAGCGGGATG ATGCACAAAG GGCAGCATTG TTTGCAGATC AGCAACCGGT GACGCAAGAC AAACGCGCCG CGATTTACTG CTTTGGCTGC ACGGCAAACG CCCAGAATCG ACTGGATAAG TAA
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Protein sequence | MTTPSAPHWT ARLARLGQWL LDHPVWLFVL FAFWLAATIG LRPLFVPDEG RYVGVALSML HTGDWLVPKL DGLPFFHKPP LFYWVTASSL AVFGTHEWAA RAAPFLAGMA SAITLFWFLN QYANRRAAGL GVLLLGTFPL FFDAAQFASM DMLVGSLIAI TILLLAHVSQ QLQARRSAKW VLVLAYATAG LGMMTKGMIG FVLPGMVITF WLLWNRRFTH LYRLISPLGL VVFLAIVAPW FALMELKFPG FLHYTFIYQQ FDRYLDSSFN NPQPIYFYVM VLFGGLIPWA VGLFWLASFP KNRQLMSLKR TNHLLSLGVI WLGSILLFFS IPTSKLIGYI LPTVPSLALL LALAFDKALT HTANEPAEQR RWQGRIASMA LIGALLGVTS VVIFAVIDHK SHKEITLAVR DRIAPDADVV FYNYYYFSVP FYLDRTQPAL VTGPWDDPNN FRSDGANTEL YTSAKFDPEA AKRILISTDQ LGAMATEAKQ GKRAPVWVFV QRDDAQRAAL FADQQPVTQD KRAAIYCFGC TANAQNRLDK
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