| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1507 |
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| Symbol | |
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| ID | 8534665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1632871 |
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| End bp | 1633980 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646383897 |
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| Product | lipopolysaccharide biosynthesis protein |
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| Protein accession | YP_003263385 |
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| Protein GI | 261856102 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3524] Capsule polysaccharide export protein |
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| TIGRFAM ID | [TIGR01010] polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCTCCA TTCTTAAGCT GTTCAAGAAC GTTTTCTTTT GGATTTTCGT ACTGATCCCG
ACATTAATCG TTTCTGCTTA TTACGGGCTC GTTGCCTCGA ATATTTATGT GTCCGAGTCA
CAAGTCGTGG TTCGCAGTGC CGATAAATCC AGTATTTCCA GCGCCAGTTT ATCGGGATTG
TTTCAAGGCT TTGGGTTTTC CAACTCGCAA TCGGATGCCT ATGTAATACA AAACTATGTG
GTCTCTCACG CGGCCGTCGA TCGCTTGATC AAGCAATACC CTGTTATAAA CTGGTATTCC
TCCAAAAATG TGGATCCAAT CAGCCGTTTC AATGGTTTCG GGCTGGATGG CAGCCTGGCG
AACTTCTACA AATACTTCGT CAAGCAGCTA GGCGTGTCGG TCGATCCGAT GAGCTCGGTG
CTCACTATTT CCGTTAAGGC ATTCAAGGCA GATGAAGCGC AAACCATCAA CCGCTCTTTG
ATTAGTTACA GTGAGGAGCT GGTTAACCAA CTCAATGACC GTGCTCGACG AGACACGATT
TCTTTTTCAG TCAATCAAGT AGATAAAGCA AAAGAACAGG CGCGCGAGTC CGCCTCGAAA
CTGGCGCAAT TCCGCAATGA ATCCGGGTTA CTTGATCCGC AAAAAGAGGC GGAATTACCG
CTCACGATGA TTGGCACACT GCAAGGCAAG TTGCTCGATG TGCGCAGCCA ATTGGCTCAG
TTGGTGGTAG TTAGTGGCAA TAGTCCGCAA ATACCCGTGC TGAAAAGAGA AGAGACACTG
CTAAAGAATG AAATTGAGCG ACTGGAAAAC AAAGTAGCCG GTTTGTCCGG TGGTTCTATC
GCCACCAAAA TGATCGAGTA CCAGCGTCTC ACCCTCGAAA ACAGCCTAGC CGAACAACAA
CTGGGCAGTG CACTAGCCTC GCTGGAGCAA GCCAATGCAG ACGCCCGAAA AAAACAACTC
TATCTTGAGC GCATTTCAGC ACCCAATTTG CCGGATGAAG CCTTTTTGCC GCATCGCCTG
CAAATCGTGC TGGCAACTTT CCTGCTGGGC CTGATTATCT GGGGGATTGT TGAATTGCTG
ACGGCCGGTA TTCGTGAGCA CATCGAGTAA
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| Protein sequence | MSSILKLFKN VFFWIFVLIP TLIVSAYYGL VASNIYVSES QVVVRSADKS SISSASLSGL
FQGFGFSNSQ SDAYVIQNYV VSHAAVDRLI KQYPVINWYS SKNVDPISRF NGFGLDGSLA
NFYKYFVKQL GVSVDPMSSV LTISVKAFKA DEAQTINRSL ISYSEELVNQ LNDRARRDTI
SFSVNQVDKA KEQARESASK LAQFRNESGL LDPQKEAELP LTMIGTLQGK LLDVRSQLAQ
LVVVSGNSPQ IPVLKREETL LKNEIERLEN KVAGLSGGSI ATKMIEYQRL TLENSLAEQQ
LGSALASLEQ ANADARKKQL YLERISAPNL PDEAFLPHRL QIVLATFLLG LIIWGIVELL
TAGIREHIE
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