| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1499 |
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| Symbol | |
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| ID | 8534657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 1621738 |
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| End bp | 1623477 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 646383889 |
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| Product | TrkA-C domain protein |
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| Protein accession | YP_003263377 |
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| Protein GI | 261856094 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0471] Di- and tricarboxylate transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.96712 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCTTG AGCAAATTGC GGTTTTAATT AGCCTAATTG GGCTGATTGC CGTGTTGATT
CATGGGCGCA TCCAAACCGG CATGGCTTTT AGCGTGCTTG CGTTGGGCTA TTACGCTACC
GGCATGATTA GCCTCAACGA TTTGCTAACG AGCTACGCCG ACCCTTCGTT GGCTGTGTTG
GTGCTGCTGA TGCTGGTTTC TGTTGCGCTC GAAAAAACGA TTCTGTTGGA GCAAATTGGC
GCGAAGTTAC TGAGCGGCAG TTATTTTGCT GCGCTTTTTC GATTAATGTC GGTCACGTCG
ATTTTTTCGG GGTTTTTGAA CAATACGGCG GTGGTGGCTT CTTTGCTCGG CATTATTAGC
CAGAACAAAC GCTTTGCGCC GTCGCGCTTG CTGATCCCGC TCTCGTATGC TGCATTGTTC
GGCGGTGTGC TAACCCTAAT CGGCACCTCG ACGAACTTGA TGATCAACGG TTTTGCCGAA
CGCGCAGGTA TGGCCCCTTT GGGCTTGTTC AGCTTCGCGC TGGTGGGTGT GCCGGTGATG
ATTGTGGGTA TTATTACGGT GATGCTGCTT TCCCGCTGGC TGCTGCCCGA ACATCAGGGC
GAAGCTACCA AGGCGGGTTC TTATTTTCTT GAAGCGCAGG TAGAGGCCGG TTCGTCTCTT
ATTGGCAAGA GCGTGCTGGA TAATCAACTG CGCAGCCTGG ATGGGTTGTT TCTGGTTGAG
ATTTTGCGTG GCACACATCT AATTTCTCCG GTTGAACCGG GGGAGATCAT CGAGGCAAGC
GATATTCTGA TTTTTGCCGG TGAGGTGGAT CGTATTTATC TGCTCAACCG CTTTGATGGG
CTTTCGCTGT TCGAAGCCCC CGTCAATATA TTGCAGAGTA ATTTGGTTGA AGTGGTGGTG
GTGGCCGATT CGATGCTGGT TGATCGCACC ATCCGCGATG TAAATTTTCG GGCATTGTTT
GATGCTGCCG TGGTGGGGAT TCGTCGTGGG GAGCGGCGTT TATCGGGCAA AATTGGCACC
ATTCCGCTCA AGGCCGGTGA TTCACTCACT TTGGCCGTGG GGCCAGACTT TGCTAGCCGT
CGTAACTTGG ATCGTAATTT TTATTTACTC AAAGGCGGCA GCCGCAAAGC CCGCCTGAAC
TTAACGCAAA GTTACAGTGT GTTCGCCGGG TTTATCGGTG TGATTATTCT GGCCGCAGTC
AACGCGCTGC CCTTGTTCAT GGGTCTAGGC GTTTTTATCG TGGGTTTGCT GGCAGTTAAG
TTCATCAGCG TGAGTGAACT GCGGCGGCGG TTTCCGTTTG AACTGTTATT GGTGATTGGC
TCGGCGCTCG TCTTATCGCA TGTAATGACA AGCTCCGGCC TTGCCGAGCT GGCGGCCAAC
GCCTTGCATC TTGTGTTGCA AGGGCAACCG GCCCTGTATG CGCTGATTGC CATTTACCTC
ACCACTTTGG TGCTGACCGA GTTAATGTCG AATAACGCGG CGGCGGCGAT GGTCTTCCCC
ATTGCGTTCA GCTTGGCGCA GAGCATGGGC GTGAGCCCTT TGCCTTTTGT AATGGCCTTG
GTGTTCGGCG CCAGCGCGAG TTTTATTACG CCGTTTGGCT ATCAAACCCA TTTGATGGTG
TACACCCCGG GGCGCTACCG TTTTATGGAT TTTGTGCGCA TCGGCGTACC CGTTTCCGTG
GCATATAGTG CAACGGTATT GACCGTTCTA CCCTTTGCCT TTCCGTTTCA CCCGCAATGA
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| Protein sequence | MNLEQIAVLI SLIGLIAVLI HGRIQTGMAF SVLALGYYAT GMISLNDLLT SYADPSLAVL
VLLMLVSVAL EKTILLEQIG AKLLSGSYFA ALFRLMSVTS IFSGFLNNTA VVASLLGIIS
QNKRFAPSRL LIPLSYAALF GGVLTLIGTS TNLMINGFAE RAGMAPLGLF SFALVGVPVM
IVGIITVMLL SRWLLPEHQG EATKAGSYFL EAQVEAGSSL IGKSVLDNQL RSLDGLFLVE
ILRGTHLISP VEPGEIIEAS DILIFAGEVD RIYLLNRFDG LSLFEAPVNI LQSNLVEVVV
VADSMLVDRT IRDVNFRALF DAAVVGIRRG ERRLSGKIGT IPLKAGDSLT LAVGPDFASR
RNLDRNFYLL KGGSRKARLN LTQSYSVFAG FIGVIILAAV NALPLFMGLG VFIVGLLAVK
FISVSELRRR FPFELLLVIG SALVLSHVMT SSGLAELAAN ALHLVLQGQP ALYALIAIYL
TTLVLTELMS NNAAAAMVFP IAFSLAQSMG VSPLPFVMAL VFGASASFIT PFGYQTHLMV
YTPGRYRFMD FVRIGVPVSV AYSATVLTVL PFAFPFHPQ
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