| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1493 |
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| Symbol | |
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| ID | 8534651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 1616218 |
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| End bp | 1618110 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 646383884 |
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| Product | Capsular polysaccharide biosynthesis protein-like protein |
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| Protein accession | YP_003263372 |
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| Protein GI | 261856089 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4421] Capsular polysaccharide biosynthesis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.21852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGT TCTTATTCAT ACACATACCC AAAGCAGCTG GAAGCTCGGT AAATAAATTA
TTTTTGGATG CCTTAGGATT AGAAAACTGC GCAATCCATT TAGAAAGTAG ATCTGAGTGG
CGAAACGAAG AAGAAAGAAA AAATCTAATC ACCCAAAAAT CATTTTTATC TGGCCACATA
ACATTTAGCG AATTCGAGAA AAAAACCAAC TTCGATCAGT ATTTTAGCTT TGCTTTTCTC
CGCGACCCTT ACACACACCT AATTTCACAT TTATCGTGGA TAAGAAAACT ATCTGACCCA
GGCCAAGAGA CAAGATTTAA TGAGCATCCT GAGTACATTC AGAATCTGTC AAAAAAATTA
TTCTCAACAA ATCTTCAGAG CACAGTTGAA CTAGAAGATC TAGTTGTAAA CTTAACACCC
CAAGAATTCT CACTTCTTGA TAATGTACAA ACAAGATACT TAAGAAACAA TAACAATCCA
CGCCCCGTGG ACGAAATTGA TGCAATAGAT GCAATTAAAA ACATTTCAAA AATTAGCCAT
ATTGGAACCA TGGAAAACAT AGATTCAGAT TTATCTGAAA TAAGTATGGC TCTTGTTTCA
AAAAAAATAG ATAAAGCCCC CATTGAAAAC ATGAACCCTA ATAGCTATGG CCTAAACCAA
GATGTTGTAA AAAAAGCCAC GAGATTGCTG AATCTTATTA AACATGATTT AGTGTTATAT
GATTTTGTCA AGAACAAAAA AAACGGGGTA ATTAAATTCA ATCAAGTTCA AAAAAACTCA
TACTCATCGG GCGATGAATT TCAATTATTC AATCCGTTCA CATCTAAAGT TAAATCATCG
ATTTATTTTG GTAAAAAAAT CGAATGTAAG TTGCTATCCA AACAAATGTT TGAAAGGTTT
GAACCATGGT TCTGGAATGG TGACATTGAT ATTAATCAAC TCGAAAAATC AGGAGCATAC
AATATCCCCG AGACTAAAAT ATGTTTCTTT GAAGATCTTA ACCTGATGGC GCATGGCGTC
CTTTTTTATG AAGATAAAAT ATTATCCGAT CCAAGTATAC ATCTATCGCC AGCTCAGCTC
AAAGCAGGGG GAATAAACCC TAATGTATTT GAATTAAATA ATAAAAATAT TATTTTACAA
AAAAATCTTC GCATATCAAA AATCACAGGT GAGGCTATTC CAATTTCACG ACCTGGTGAG
GCAGTTTATG GCCATTGGTT GGTAGACATA CTTCCACGAG TTATTTTGGC AAAACATGAA
GGGTATGAAT GCCCTTTAAT CTCAACCATC CACATTCCAA ACTATGCAAG AGATTTACTT
TCCCTGATCG GCTTTGATGA TAAGAATATT ATAACTTATA AGCCTGCCGT CGAATATGTG
GAAATTGAAA AAGCAATTGT TCCATCTTAC CTTAGACAAG AAAGTGGATT TTCTAATTTA
ATGTCACTAA CATCGAATGC CTTTTCTGCA TATTGGTCGG ATAAAAGTGA AAAAAAAATA
TTTGTCAGCA GAGGGGATTA TAACAGCAAC CAAACCCTAG TTAATCGCGC TGAATTAATT
CAACTTCTTG AAAAACATGG TTTTGATATT ATCGAACCCC ACAAACTTGA CATTAAAGAG
CAGATAAGTA AGTTTTCGGA GGCAGATCTT GTAATTGGTG AGTATGGCTC TGCTATGCAT
AACACTATTT TTTGCAAGCC TAATACCAGA GTGATTGTTT TGCAATCCGC AACGCCCTTA
CCGTTTGTCC AAGCAGGTCT AGGGCGGGCG TTAAATCACC CAACAGGATT CTTATTTGGC
ACCCCCTCAC CAAGTCACGA TACGGTTAAT AAGGGCAGAT CGTTTATAGC ACCCTTGGAT
GAATTAAAAG TAATCCTTGA GAAATACACA TAA
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| Protein sequence | MKKFLFIHIP KAAGSSVNKL FLDALGLENC AIHLESRSEW RNEEERKNLI TQKSFLSGHI
TFSEFEKKTN FDQYFSFAFL RDPYTHLISH LSWIRKLSDP GQETRFNEHP EYIQNLSKKL
FSTNLQSTVE LEDLVVNLTP QEFSLLDNVQ TRYLRNNNNP RPVDEIDAID AIKNISKISH
IGTMENIDSD LSEISMALVS KKIDKAPIEN MNPNSYGLNQ DVVKKATRLL NLIKHDLVLY
DFVKNKKNGV IKFNQVQKNS YSSGDEFQLF NPFTSKVKSS IYFGKKIECK LLSKQMFERF
EPWFWNGDID INQLEKSGAY NIPETKICFF EDLNLMAHGV LFYEDKILSD PSIHLSPAQL
KAGGINPNVF ELNNKNIILQ KNLRISKITG EAIPISRPGE AVYGHWLVDI LPRVILAKHE
GYECPLISTI HIPNYARDLL SLIGFDDKNI ITYKPAVEYV EIEKAIVPSY LRQESGFSNL
MSLTSNAFSA YWSDKSEKKI FVSRGDYNSN QTLVNRAELI QLLEKHGFDI IEPHKLDIKE
QISKFSEADL VIGEYGSAMH NTIFCKPNTR VIVLQSATPL PFVQAGLGRA LNHPTGFLFG
TPSPSHDTVN KGRSFIAPLD ELKVILEKYT
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