Gene Hneap_1487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_1487 
Symbol 
ID8534645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand+ 
Start bp1609350 
End bp1609904 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content52% 
IMG OID646383878 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_003263366 
Protein GI261856083 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAAAA AACCTACAAA ACTTTTGGGC ACCCTGCTTC TGGAACCCAA AGTATTCGGC 
GATGAACGCG GATTTTTCAT GGAAACCTGG AACGCGCAGC GGTATCGGGA ATTCGGTCTT 
GAAGAAAACT TTGTACAAGA CAATCTCTCT CGATCACGCC GTGGTGTATT ACGTGGATTG 
CACTTTCAGG AGCCCAACCC GCAGGGCAAA CTGGTGTCGG TACTTGATGG CGAAGTCTTT 
GATGTTGCCG TCGACATCCG GCGCGGATCA CCCACGTTCG GTCAATGGGA AGGCTACACC 
CTGTCGGCGC AGAACAAGTT GCAATTCTAT ATCCCACCGG GTTTCGCCCA TGGCTTTTGC 
GTGACCAGTG ACACAGCCCT CTTTGCCTAC AAGTGTACCG AGTTGTATCA GCCAGCCAAC 
GAGGGTGCCA TTGCTTGGGA CGACCCTGAT TTAAACATCC CCTGGCCAAT TGATCAGCCC 
GAGCTTTCTG CCAAAGATGC CAAAGGCATT CGTCTGGCGG ATTACCCCTC GGACAAACTA 
CCCCAATTCG ACTAG
 
Protein sequence
MIKKPTKLLG TLLLEPKVFG DERGFFMETW NAQRYREFGL EENFVQDNLS RSRRGVLRGL 
HFQEPNPQGK LVSVLDGEVF DVAVDIRRGS PTFGQWEGYT LSAQNKLQFY IPPGFAHGFC 
VTSDTALFAY KCTELYQPAN EGAIAWDDPD LNIPWPIDQP ELSAKDAKGI RLADYPSDKL 
PQFD