Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1468 |
Symbol | |
ID | 8534625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 1584295 |
End bp | 1585770 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 646383858 |
Product | NusA antitermination factor |
Protein accession | YP_003263347 |
Protein GI | 261856064 |
COG category | [K] Transcription |
COG ID | [COG0195] Transcription elongation factor |
TIGRFAM ID | [TIGR01953] transcription termination factor NusA [TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0601103 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAAG AGATTCTTTT TGTAGCCGAT GCGGTTTCAA ACGAAAAAGG GGTTGACCGC GAAGTCATTT TCGAGGCGAT CGAAGCCGCG CTTGCCCAAG CTGCCCGCAA ACGTCATGGC GGCGACATCG ATACACGAGT GCAAATCGAC CATGAAACGG GTGATTACCG CACATTCCGT CGCTGGCAGG TTGTCGAGGG CGATTCTTCT GAGTTCCCAG AGCGTGAAAT GATTCTCGAA GCGGCGCAGA TGGACGATCC TGATATCAAA GTGGGTGAGT TCGTCGAGGA AGAAATTGAG TCCGTCGAAT TCGGCCGCAT CGCGGCTCAA GCCGCCAAGC AAGTCATCGT GCAGAAAGTG CGCGAGGCAG AGCGGCGCCA GATCGTCGAC GCCTACATCG ATCGCAAGGG CAGCCTGATC ATGGGGCTGA TCAAGCGAAT TGATCGCGGG AATGTGATCT TGGATTTGGG CGGTAACGTC GAAGCGCTGA TCCCACGGGA TGAAATGATC GGCCGTGAAG CGGTGCGTCC AGGCGACCGT CTGCGTGGCT ATTTGGCGGA TGTTCGTCAT GAGCCGCGTG GCCCGCAGCT GTTCGTCAGC CGCACTGCAC CCCAGTTCCT GATCGAACTG TTCAAGCTGG AAGTGCCGGA AATCGAACAG GGCTTGATTG AAATCAAGGG TGCCGCGCGT GACCCCGGCT TGCGTGCCAA AATCGCCGTT GAATCCCGTG ATAGCCGGAT CGATCCGGTC GGTACCTGTG TCGGTATGCG CGGCTCGCGT GTTCAGTCGG TTACCAATGA ACTCAACGGC GAACGCGTGG ACATCATCAT CTGGGATAGC AACCCGGCTC AGTTTGTCAT CAATGCCATG TCACCGGCAG AAGTCGTGTC GATTGTGGTC GATGAAGATC GACACAGCAT GGACGTTGCC GTTACAGAAG AAAAACTCTC CCAGGCGATT GGTCGCGGTG GACAGAACGT GCGACTGGCT AGCCAGTTGA CCGGATGGCA CCTGAATGTG ATGGGCGAGG AAGAAGCGGT TGCGAAAGTA GAAACCGAAA CCCGTCGCGC TACTGAAGCA TTCATGCGTG ATCTTGACGT CGATGAAGAT GTGGCCGCCG TGCTGGTCGA GGCAGGTTTT TCCTCTCTGG AAGAAATTGC TTACGTGCCG ACCGCCGAAC TGCTGGATGT TGAAGGTTTC GATGAGGGTA TCGTTGAAGA ACTTCGCAAC CGCGCTCGCG ACGCACTCTT GGTTCAAGCT ATTTCAGACG ACGCTGGTGA ATCGACGGAA GAACTCGATA TCGCCCAGCT GGAAGGCATG ACACCTGAAC TGCTCACCAT ATTGAATGCG GCTGGTGTGC ACACATCAGA TGATCTGGCA GAGCTGTCGG TTGACGAGAT GACCGCCTTT GACGGCGTCG ATGAGGCATT GGCACAACAG TTGATCATGG CGGCGCGTGC GCCGTGGTTC GCCTAA
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Protein sequence | MSKEILFVAD AVSNEKGVDR EVIFEAIEAA LAQAARKRHG GDIDTRVQID HETGDYRTFR RWQVVEGDSS EFPEREMILE AAQMDDPDIK VGEFVEEEIE SVEFGRIAAQ AAKQVIVQKV REAERRQIVD AYIDRKGSLI MGLIKRIDRG NVILDLGGNV EALIPRDEMI GREAVRPGDR LRGYLADVRH EPRGPQLFVS RTAPQFLIEL FKLEVPEIEQ GLIEIKGAAR DPGLRAKIAV ESRDSRIDPV GTCVGMRGSR VQSVTNELNG ERVDIIIWDS NPAQFVINAM SPAEVVSIVV DEDRHSMDVA VTEEKLSQAI GRGGQNVRLA SQLTGWHLNV MGEEEAVAKV ETETRRATEA FMRDLDVDED VAAVLVEAGF SSLEEIAYVP TAELLDVEGF DEGIVEELRN RARDALLVQA ISDDAGESTE ELDIAQLEGM TPELLTILNA AGVHTSDDLA ELSVDEMTAF DGVDEALAQQ LIMAARAPWF A
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