| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1447 |
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| Symbol | |
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| ID | 8534604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1562895 |
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| End bp | 1564304 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 646383837 |
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| Product | membrane-associated zinc metalloprotease |
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| Protein accession | YP_003263326 |
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| Protein GI | 261856043 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.843225 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATTC TAATGAGTTT GTTGGGGTTC CTGATCACCA TCGCGGTGTT GGTCGCATTC
CATGAATACG GCCACTTCTG GGTTGCCCGA AAGCTTGGGG TCAAGGTTCT GACGTACTCA
CTCGGCTTTG GCCCTACGTT ATGGTCCACC CGTAAGGGGC CGGATGCGAT TGAATACCGT
ATTGCCGCTT TTCCTTTGGG CGGTTACGTA AAAATGCTGG ATGAACGCGA AGCGCCCGTC
GACCCATCCG AGCAGCATCG GGCGTTCAAC AGCCAGCCCG TCTGGAAGCG TTTTCTGATT
GTTCTTGCCG GACCGGTTGC GAATATTCTG CTTGCACTCG TACTCTGGAT GATGATGTTC
ATGGTCGGAG TTCAGGGTGT GCTGCCGAAG GTTGGCGTGG TGCCCGCCGA TTCCGTTCTG
GCTCGAAGCG GTCTTCAGGA TGGTGATGTG ATTACGCAAG TCGGAGGACA AGCCATTCAT
AGCCTTTCCG ATCTGCGACT TGCTGTGTTG GAAGGGGGCG TGGCCGGGGC CAAAGTGCCC
ATCGAATTTG AACATCAAGG TGCTGTCAAC ACGGGCACTC TCGATTTGAC CAAGCTCAAA
CCACTTCAGG GGAATCATCA GGGACCGGCG AGGGATGTGT TGAGAGAGAT TGGCTATCGA
TTGTGGTCGC CAAAGGGTGA TGCCCTCATC CATAAGGTGA TGGCTGCCAG CCCCGCCGAG
CAAGCCGGCT TGAAGAAAGG CGACATCATT GAGGAGATCA ATGGTTCGAC GTATCGGGAT
CCCTGGGCTC TGATTACCCG CATCGAGCAT TCTCCTGGCA AGCCCGTCAC GCTGACCGTG
CTTCGAGATG GGCGTACAGA ACAGATCACG GTGACGCCCA AGACCGAAAC ATCCACCAAT
GTCGATGGCA AAACAACCTC CGTTGGGCGG ATCGGTGCCC AGTTGGGCCT GGTGCCCGAT
GCCGTGGCGC GCGCGAAGGC TGATGGGATA CAGATGCTGG TTCTGGAGCG ATACAATCCG
GTTGAAGCGT TATCTATGGC CGCATCGCGG AGTTGGGCCA TGACCACGCT GACTTTTAAT
GTCTTCGGTG GCTTGCTTAC CGGTCAGGCG AGCTTATCCA ATCTCTCAGG TCCGGTGGCG
ATTGCCGAGT ACGCCGGGCA GAGTCTGGTT ATCGGCTTTT CAACTTTCCT TGGGTTCATG
GCACTGGTCA GCCTGTCGCT CGCCATCATG AATTTGCTGC CCATCCCCTT GCTGGACGGC
GGCCATTTGG TGCTTTATGT GGTTGAAGCT CTTCGTGGGA AGCCCGCGGA GGCCGCGCTT
GAAGCCGTTG CAACCAAGAT AGGTCTGGCC TTTCTGGTGA GTTTGATGGC GCTGGCTTTC
TATAATGACA TCTCACGGTT GCTGCACTAG
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| Protein sequence | MNILMSLLGF LITIAVLVAF HEYGHFWVAR KLGVKVLTYS LGFGPTLWST RKGPDAIEYR
IAAFPLGGYV KMLDEREAPV DPSEQHRAFN SQPVWKRFLI VLAGPVANIL LALVLWMMMF
MVGVQGVLPK VGVVPADSVL ARSGLQDGDV ITQVGGQAIH SLSDLRLAVL EGGVAGAKVP
IEFEHQGAVN TGTLDLTKLK PLQGNHQGPA RDVLREIGYR LWSPKGDALI HKVMAASPAE
QAGLKKGDII EEINGSTYRD PWALITRIEH SPGKPVTLTV LRDGRTEQIT VTPKTETSTN
VDGKTTSVGR IGAQLGLVPD AVARAKADGI QMLVLERYNP VEALSMAASR SWAMTTLTFN
VFGGLLTGQA SLSNLSGPVA IAEYAGQSLV IGFSTFLGFM ALVSLSLAIM NLLPIPLLDG
GHLVLYVVEA LRGKPAEAAL EAVATKIGLA FLVSLMALAF YNDISRLLH
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