Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1441 |
Symbol | |
ID | 8534598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 1555719 |
End bp | 1557104 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 646383831 |
Product | fumarate lyase |
Protein accession | YP_003263320 |
Protein GI | 261856037 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAACCC AAAAATTTCG TACAGAGCAT GACAGCATCG GGCCAGTGGA CATACCGGCC GATGCGTTGT GGGGTGCACA GACCCAGCGA GCTATCGATA ACTTCCCCAT TAGTGGCATG CCGTTGCCCG CTAAATTTAT CCGGGCATTG GCTCAGGTTA AGACTGCGTG CGCGCAGGCA AATATGACCT TGGGCGTATT ACCCCCAGCA CTGGGTGAAC CGATCGTGCA GGCCAGCCGC GAAATTGCAG CGGGGCACTA TGTCGATGCT TTCCCTATTG ATGTCTACCA GACGGGTTCG GGCACCAGTA CCAACATGAA TGCAAACGAA GTCATTGCGC GACTAGCCAA TGATTCGCTT CTAAATTCGG ATCTTCGTGT TCATCCGAAT GACCACGTCA ATATGAGCCA AAGTTCGAAT GATGTGATTC CCACCGCCAT TCGTGTTTCA GCGGTCGAGG CGGTCGAACA TGAGTTGCTG CCCGCGCTCG ACTCCTTGAA GCAGTCTATC GAAGACAAAG CTCAAGCGCT GGCCGGAGTA ACCAAAACCG GTCGCACGCA TTTGATGGAT GCGATGCCTG TTCGTTTTGA TCAGACACTA ATGGCCTATG TCGATCACCT TGATGGCGCC CGCTTGGGAA TCGTTCAGGC TGTTGAGCGG ATGCAGGCCC TGCCTCAGGG CGGCACCGCG GTCGGCACGG GCATCAACGC GCCCGAAGGC TTCTCTGCTG CCTTTATTGC GGCTCTTAAC AACGAAACTG GTGGTGCGTA TTGTTCCATG CTCCGCCCGT TTGCGGGTCT GGCTGCGCAG GATGAACCGG TTGCGATGTC TGCTGCTTTG CGCAGTTTGG CCATCGTGCT AACCAAAATT TCTAATGACC TGCGGCTCAT GAATTCGGGA CCGTTGGCGG GCTTCAGTGA AATCAGTCTT CCTGACTTGC AGCCCGGCAG TTCGATTATG CCCGGCAAGG TCAACCCTGT TGTTCCCGAA GCCGTCGCCA TGGTAGCCGC ACAGGTTCAG GGTTTAGATA TGGCTGTCGC CCTTGCTGGC CAATCCGGTT TGTTCGAGCT CAACGTGATG TTGCCTTTGA TTGCCAATAA TCTTTTGCAA TCCATTCAAT TGTTATCAAA TGCCATGCAT TTGTTGGCGG ATAAGGCGAT TGCCGGTTTT ACCGTCAATC ATGAGCGGAT CGAGGCTGCC TTGGGTATGA ACCCCATTCT AGTGACGGCC CTGAACCCAG TGATTGGTTA TGAATTAGGG GCGAAGATTG CCAAAAGAGC CTATGCCGAA CGCAGAAGCG TATTGAGTGT AGCTCTTGAG ATGACAGAGC TGTCCGAAGA AGAACTCAAG CGCTTACTGG ATCCTGTCTT GATGACCGGA ATTTAA
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Protein sequence | MTTQKFRTEH DSIGPVDIPA DALWGAQTQR AIDNFPISGM PLPAKFIRAL AQVKTACAQA NMTLGVLPPA LGEPIVQASR EIAAGHYVDA FPIDVYQTGS GTSTNMNANE VIARLANDSL LNSDLRVHPN DHVNMSQSSN DVIPTAIRVS AVEAVEHELL PALDSLKQSI EDKAQALAGV TKTGRTHLMD AMPVRFDQTL MAYVDHLDGA RLGIVQAVER MQALPQGGTA VGTGINAPEG FSAAFIAALN NETGGAYCSM LRPFAGLAAQ DEPVAMSAAL RSLAIVLTKI SNDLRLMNSG PLAGFSEISL PDLQPGSSIM PGKVNPVVPE AVAMVAAQVQ GLDMAVALAG QSGLFELNVM LPLIANNLLQ SIQLLSNAMH LLADKAIAGF TVNHERIEAA LGMNPILVTA LNPVIGYELG AKIAKRAYAE RRSVLSVALE MTELSEEELK RLLDPVLMTG I
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