| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1439 |
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| Symbol | |
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| ID | 8534596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 1551131 |
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| End bp | 1552273 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 646383830 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003263319 |
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| Protein GI | 261856036 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0465471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAG GTACCCCCAT CCGCATGATC ATCATGCTGC TGCTGGTTGC ACTGGTGTTT
GGCGGCATCT ACGGCTTCCA GCAATTCCGT AATGAAATGA TATCCAAGGC GATTCGTGGC
AAGGGTATAC CGCCGCAGGC GGTCTCTACC ATCGTGGTCA AAAAGGAAGA ATGGCAACCT
AAGGTCGATG TGATCGGCTC CTTGCAGGCG GCACAATCCA CAGAGCTGGC CACGGAAGTC
AGTGGCCTGA TTACGCAGAT TCATTTCAAA TCCGGCCAGA CGGTCAAAAC GGGCGAGAAA
CTGCTGGAAC TCAATGATGC GCCGCTGAAG GCTCAATTGG CTCAGTTGCA GGCAGCCGTC
GTACTCGCAC GGCAGAACCT GACACGCGAC CAGGCACAAT TGAAAATCAA TGCGGTGAGT
CGTGCCGTGG TCGAGAGCGA TCAGGCCAAT CTCAAAAGCG CCGAGGCACA GGTTAAGCAG
CAAGAGGCGC TGATCGATCA GAAAATTCTC AAGGCGCCAT TTGCAGGCAA ATTGGGTATT
CGCAAAGTCG ATTTAGGTGA ATATCTCTCG GCCGGCACCG CGGTGGTCAG CCTCCAGAAG
CTCGACCCGA TGTATGTCGA TTTCACCATC CCGCAATCGG AATTGTCTCT GGTCAGAGCC
GGCAAAAACA TTTCCATCCA AACAAATGCG TTCGCTGGAA AAACCTTCGA GGGGAAAATC
ACGGCCATCG AACCGCAGGT GGATACGAGC ACCCGTAACA TTACGGTTCG TGCCGCCATT
GCCAATCCCG ACGGCAAGCT CTTGCCCGGA CTGTTTGTGA CGGCGCATGT CGACCAGGGT
GAAGCTCAGC AGTATTTGAC CCTACCCAGT ACCGCAATTG CCTACAACCC TTACGGCAGC
ACCGTTTTCG TCGTCAAGGA TGAGGGCAAG GACGATCAGG GCAAACCCAA ACTCACGGTT
GAACAACGCG TCGTTACCAC TGGCCCGACA CGCGGCGATC AGGTGGCGAT CCTCGATGGT
CTCAAATCGG GCGAAACGGT GGTGACGGCC GGTCAACTCA AGCTCAGAAA CGGTGCGCCG
GTGTTCATCA ACAATAAAAT CCAGCCTTCA AATAACCCGC ACCCCGAGGT TAAAGACGAA
TGA
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| Protein sequence | MKKGTPIRMI IMLLLVALVF GGIYGFQQFR NEMISKAIRG KGIPPQAVST IVVKKEEWQP
KVDVIGSLQA AQSTELATEV SGLITQIHFK SGQTVKTGEK LLELNDAPLK AQLAQLQAAV
VLARQNLTRD QAQLKINAVS RAVVESDQAN LKSAEAQVKQ QEALIDQKIL KAPFAGKLGI
RKVDLGEYLS AGTAVVSLQK LDPMYVDFTI PQSELSLVRA GKNISIQTNA FAGKTFEGKI
TAIEPQVDTS TRNITVRAAI ANPDGKLLPG LFVTAHVDQG EAQQYLTLPS TAIAYNPYGS
TVFVVKDEGK DDQGKPKLTV EQRVVTTGPT RGDQVAILDG LKSGETVVTA GQLKLRNGAP
VFINNKIQPS NNPHPEVKDE
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