| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1414 |
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| Symbol | |
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| ID | 8534571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 1524364 |
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| End bp | 1525527 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 646383806 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003263295 |
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| Protein GI | 261856012 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTAATG CCCACTTACG TTCAAAAATC GATATCCGCC CAGCCCTTAC CCTGCTGATC
ACGGCCAGTT TGATGCTGGG CGCGGGGAGT GCTTTTGCCG AAAATGGCCC CGGTAAAAAA
ATGCCGCCGC CAATCGTGCC CATCGAAACG GTCAAAACGG CATCGGTGAC GATCCATCAA
ACGTTCAGTG GCGTCACCCA GGCAGAACGA CAGGTCGATG TGCGCGCTCA AGTGTCCGGG
ATTTTGAAAA CCCGCGCTTA CGTCGAGGGC CAGAAAGTAG ACAAGGGCAC GCCGTTGTTC
GTCATCGACG ATAAACCCTA TGTGGCCGCC TTGAACGAGG CCATCGCAAA TCAGTCTTCG
GCAGAAGCCG CTCTGAACGC GGCCCAACGC AACTGGAATC GTATCAAGAC GCTCTACAGC
AAGGGTGTCG CCAGCGTCAA AGAGCGCGAC GATGCCCAGT CGGCATTGGA GATGGCACAA
GCAGCGGTCA AGGTGGCGCA GGCCAAAAAA GTGGCCGCCC GAATTAATGT CGACTACACC
CGCATCAATG CACCGATTGC CGGAATCGCT GGCCGCCGCA CGGTCGCCGT GGGAAATCTT
GTCAACGTCG GTGACACGCT GACACAAATC GAAGCGATCG ATCCGATTCA AGTCATCCTT
ACCACCTCTG CCGATAACCC CTACGCCGAC AGCCCCGCAC TCAAACCCGA CCCGGACCAC
CCGATCCCGG CTACGCTTCT TTTTGGTGCC GAAGGCACCA AACGGTTGGA TGGCAAGCTG
AATTATCGTG CGGTCAGCAT CGATCCCAAT ACCAACAGCA TCACGCTACG GGGGATTTTC
CCCAATCCCG ATCAAGCGCT TCAACCCAAT GAATTCGTTC GGGTGAACGT CGCGGTGGAC
AAGCTCGACG CGGCGCTGGT CATTCCGCAA ACCGCACTCA CCAGTGGCAT TCGACCCGGC
AGTCATGCGG TATACACCGT GGACAGTCAG AACAAAATCA CCTTGACTCC GGTCGAGCTC
GGCCCGATGA GCGACCAAGG GCAAGTGATC CAATCAGGGT TATCCGCAGG GCAGCGGATC
GTGACCGACG GCCTGGTCAA ATTACGTCCC GATATCGTGG TTGAACCCTA TAAAGCCGGT
AAAGAGAAAA CCGGTAAAGA GTAA
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| Protein sequence | MVNAHLRSKI DIRPALTLLI TASLMLGAGS AFAENGPGKK MPPPIVPIET VKTASVTIHQ
TFSGVTQAER QVDVRAQVSG ILKTRAYVEG QKVDKGTPLF VIDDKPYVAA LNEAIANQSS
AEAALNAAQR NWNRIKTLYS KGVASVKERD DAQSALEMAQ AAVKVAQAKK VAARINVDYT
RINAPIAGIA GRRTVAVGNL VNVGDTLTQI EAIDPIQVIL TTSADNPYAD SPALKPDPDH
PIPATLLFGA EGTKRLDGKL NYRAVSIDPN TNSITLRGIF PNPDQALQPN EFVRVNVAVD
KLDAALVIPQ TALTSGIRPG SHAVYTVDSQ NKITLTPVEL GPMSDQGQVI QSGLSAGQRI
VTDGLVKLRP DIVVEPYKAG KEKTGKE
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