| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1402 |
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| Symbol | |
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| ID | 8534558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1509151 |
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| End bp | 1511634 |
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| Gene Length | 2484 bp |
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| Protein Length | 827 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 646383793 |
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| Product | plasma-membrane proton-efflux P-type ATPase |
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| Protein accession | YP_003263283 |
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| Protein GI | 261856000 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01647] plasma-membrane proton-efflux P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.168621 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTAAAG CCATCGATAG TCAGCAAGTT GAGAAGCTCA GCATTGATGA ATTGGCCAAG
CAACTGGAAA GCACATCCAA GGGCTTGAGC AAGGCGGAGG CTACGGCTCG ACTGGCTGGG
TTCGGTCCGA ACGCTCTGGT GGAAAAAAAG GTCAGCCCGT GGATCAAGTT TCTGGGTTAC
TTCTGGGGGC CTATTCCCTG GATGATTGAG GTGGCCGCCG TTCTGTCGGC CATCGTGCGT
CATTGGCCGG ACTTTTTCAT CATTCTCGCC TTGCTGTTGT TCAATGCGGG TGTGGGATTT
TGGCAGGAGT TCAAGGCGGC CAATGCGCTT GCGGCGCTGA AGAATCAGTT GGCGCTCCGG
GCTCGGGTTC TGCGTGACGG GCAATGGAGC GAAATTGATG CAGCCGAACT GGTGCCGGGC
GACGTTGTCC GGTTGCGGCT GGGTGACATT ATTCCCGCCG ATGCCAAATT GATCGAAGGG
GATTATCTGT CGGTCGATCA GTCCGCGCTG ACGGGCGAAT CACTACCCGT GGACAAAAAA
ACGGGTGAAG TGGTGTATTC CGGCTCGATC GCCAAGCAAG GCGAAATGGT GGCGATGATC
ACGGCCACTG GCAGTCAGAC TTTCTTTGGT ATGACGGCGA AACTTGTCGC CGATGCGGGT
GCGCCGTCGC ACTTTCAGAA AGCCGTTCTG GCCATTGGCG ATTACCTGAT TTTTATGAGT
CTCGGGCTCG TAGCGGTGCT GATTTTGGTG CAACTCCATC GAGGTGCACC GATGCTCGAA
CTGTTCCAGT TTGCGCTGAT TCTGACGGTT GCCTCCATTC CCGTGGCGAT GCCCGCCGTG
TTGTCGGTCA CGATGGCAGT CGGCGCCATG GCTTTATCGA AAAAGGGGGC GATTGTTTCG
AAATTGCAGT CCATTGAAGA AATGGCGGGT ATCGACATTT TGTGCTCGGA CAAAACGGGC
ACATTGACTC AAAACAAGCT CACGCTGGGC GAACCTGCCG TATTCGCGGC GAAGGACGCA
CAGGATCTGA TTCTGGCTGC CGCGCTGGCC TCCAAGGCAG AGGACAAAGA TGCGATTGAT
CAGGCGGTGA TTGGCGGATT GAATGACGCC CGTGTACTTG AGCAATACAC GCAAACGGCC
TTCGTGCCAT TCGATCCGAT GGGTAAGCGG ACCGAAGCTG CCATTACGTC ATCTGCGGGT
CAGCGCTTTA AAACCACCAA GGGCGCGCCT CAGGTTATTG TCGCTCTGGC TCAGCTTACC
GGTGACGATG CCCAAAGGGC CAATCAACTG GTTGACGAGT ATGCTGCCAA GGGGTTTCGC
ACCTTGGGTG TCGCGCGTTC CGATGACGGT AAGAACTGGA TTTTCCTTGG CATTCTGCCG
ATGTTCGACC CGCCGCGTGA CGATTCGGCG CAAACGATCA AGGAAGCGAA TGAACACGGC
ATCGCTGTGA AAATGGTGAC GGGCGACAAT GTCGCTATTG CACGACAAAT CGCGGGACAA
CTGGGTTTGG GTCAAGCAAT TCAACCGGCG AGTAATCTGC TTGGTGCTGA TGGCGCTAAA
GCGCTGGATG CCGCCGAACA AATCGAGAAA GCCGATGGGT ATGCCCAAGT CTTTCCCGAA
GACAAGTACG CCATTGTCAA AGCACTGCAG GGTCGACACC ACCTCGTTGC CATGACCGGG
GATGGCGTCA ACGATGCACC GGCGCTCAAG CAGGCGGACG TGGGAATTGC CGTTTCCGGT
GCGACGGATG CGGCGCGTGC GGCCGCCGAT CTGATTCTCA CGGCACCGGG GTTATCCACC
ATTACGACCG CAGTCGAAGA AGCCCGACGT ATTTTCGAGC GCATGAACTC TTACGCCATT
TACCGAATCA ATGAAACGAT TCGGATCATG ATCTTCGTGG TGTTGGCGAT GATCGTGTTC
AACTTCTACC CGATCACGGC GATCATGATC ATTCTTCTGG CCCTCTTCAA CGATCTGCCG
ATCATGACGA TTGCCTACGA CCACACCAAG GTCGAGCCCA AACCCGTGCG CTGGAACATG
CACCGTGTGC TGGCGGTATC AACGGCAATG GGCGTGACCG GCACCATCGG CAGTTTTCTG
ATGTTGTACC TGGCTATGAA CTGGCTGCAT CTTTCCATCC CGCAAGTACA AACCTATGTG
TTTCTCAAGA TGGCGGTATC CGGCCACTTG GCTTTGTTTG TCGCCAGGGC GCGCGGTTGG
TATCTCGCCC GCCCTTATCC CGCGCCGGTC ATGATCTGGA CGGCGGTCGC CACCAAGGTT
GCTGCCACCT TGTTGTGTTT GTACCCAATG GGCTTGATGG CGCCAATCAC CTGGTTTGAT
GTGGCGCTCA TCTGGGTGTA TTCAATTGTC TGGTCATTTG TGACGGATGT TGCCAAAGTA
AGCATTCAGC GACGCTTCGA CTATACGGCG GCACCGCATC GCAGTTTCCT TAAAACGCTG
CGCCATCCCT TGCAACACGG ATAA
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| Protein sequence | MVKAIDSQQV EKLSIDELAK QLESTSKGLS KAEATARLAG FGPNALVEKK VSPWIKFLGY
FWGPIPWMIE VAAVLSAIVR HWPDFFIILA LLLFNAGVGF WQEFKAANAL AALKNQLALR
ARVLRDGQWS EIDAAELVPG DVVRLRLGDI IPADAKLIEG DYLSVDQSAL TGESLPVDKK
TGEVVYSGSI AKQGEMVAMI TATGSQTFFG MTAKLVADAG APSHFQKAVL AIGDYLIFMS
LGLVAVLILV QLHRGAPMLE LFQFALILTV ASIPVAMPAV LSVTMAVGAM ALSKKGAIVS
KLQSIEEMAG IDILCSDKTG TLTQNKLTLG EPAVFAAKDA QDLILAAALA SKAEDKDAID
QAVIGGLNDA RVLEQYTQTA FVPFDPMGKR TEAAITSSAG QRFKTTKGAP QVIVALAQLT
GDDAQRANQL VDEYAAKGFR TLGVARSDDG KNWIFLGILP MFDPPRDDSA QTIKEANEHG
IAVKMVTGDN VAIARQIAGQ LGLGQAIQPA SNLLGADGAK ALDAAEQIEK ADGYAQVFPE
DKYAIVKALQ GRHHLVAMTG DGVNDAPALK QADVGIAVSG ATDAARAAAD LILTAPGLST
ITTAVEEARR IFERMNSYAI YRINETIRIM IFVVLAMIVF NFYPITAIMI ILLALFNDLP
IMTIAYDHTK VEPKPVRWNM HRVLAVSTAM GVTGTIGSFL MLYLAMNWLH LSIPQVQTYV
FLKMAVSGHL ALFVARARGW YLARPYPAPV MIWTAVATKV AATLLCLYPM GLMAPITWFD
VALIWVYSIV WSFVTDVAKV SIQRRFDYTA APHRSFLKTL RHPLQHG
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