| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1392 |
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| Symbol | |
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| ID | 8534548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1498865 |
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| End bp | 1500346 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 646383783 |
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| Product | protease Do |
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| Protein accession | YP_003263273 |
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| Protein GI | 261855990 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAATCCT GGGTACCCAT TACGGTGAAC GCATTGTTAT TTTCTCTTGT GGCTTTTCGC
CGATTGTTCT GGTCATCCCT TGTCTTGGTT GTGGCTGTCT CGCTCACGGC TTGTGGTGAC
CAAAAGTCCG AGGCGCAAGT CACCGGTCTA CCCGACTTTT CTGCATTGGT GGCGGCCAAT
AATGCCTCCG TGGTCAATGT GAGTGCCATC GTCCCGTTGG CGGCCATGCC GGATACCTCA
AATCAAGGTA GGAATGACAG CGAACTCAAC CAGTTTTTCC GACAGTTTTT TGGCTTTAAT
GGTCCGGCGC CAGGTGGATC GACGCCTCAG GAACCCACGC CGCCGGTCGA GCCTGAATCT
AGTAGCGGTT CGGGTTTCGT CCTGAGTCAG GATGGTGAAA TCGTAACCAA CGAGCATGTG
ATCGATGGCG CATCGCAAAT TTACGTTCGG CTGGCGGATG GTCGTGAACT GAAAGCAAAG
GTTCTCGGCA GCGATAAGGC CGGTGACATT GCGTTGCTCA AGATTGATGC CAAAGGGCTC
AAGCCCGTCA AAATCGGTAA TTCCGATCAA GTCAAACCCG GGCAATGGGC GGTGGCGATC
GGCTCGCCTT TCGGGTTTGA TCATTCCGTC ACGGCTGGTG TCGTCAGCGC CAAGGGACGC
TCGCTGCCGG GAGATGACAA TCAGCGATAT GTGCCGTATC TGCAGAGCGA TGTTGCGATC
AACCCGGGTA GTTCAGGTGG CCCACTGTTC AACGTCAAGG GTGAGGTCAT TGGCATCAAT
GCGCAGATTC TCACGGAATC AGGTACTTAC AATGGCCTGT CGTTCTCCAT CCCGATCAAT
TACGCGTTGC AGGTGGTGGA ACAATTAAAG CAGCACGGTA CGGTTGATCG TGGCTTCCTG
GGGGTTCAGA TTCAGTCCCT GAACCGCGAG ATGGCACAAG CCATGGGTCT TGACCGTGCC
AAGGGTGCAT TGGTGACCGG GTTCGTTTCA GGGTCGCCTG CCGAGCAATC CGCGCTGCAA
CCGGGCGATA TCATCATTGC TGCCAATGGC CACCCGATTA CGGAATCTGC CGACTTGCCG
CAAACCATCG GTGTGCTCCC ACCGGGAAGC GACGTGCGCC TTGAGGTGCT GACGAAAGGT
AAGACGCACA ACATATCAAT AAAGCTGGCT GCGTTGCCTC AACATGCGCC GAGGCAGGTT
CAGTCGATGA AATCTCATGA TCTGATCGTT GAGGATTTCG GCCTGCTTTT GACGGACGAT
GGCGGCACGA TTCGAGTCAA GGCCGTCGAG CCAAACAGCC CGGCCGCGAG ATCGGGCCTG
GCGGCTCAGG ACATTCTGCT CACGCTCAAT CAGCGCGCGT TGAATTCCTT GGATGCCGCA
CAAAATGCTT TCGAGTCAGC GCGTAAAGAC AGGCCCAATG CCGTTCTTAT GCGCCGTGGT
GATCAACAGC ATTACATTGC CCTCTCGCTT CAAGCCGACT GA
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| Protein sequence | MKSWVPITVN ALLFSLVAFR RLFWSSLVLV VAVSLTACGD QKSEAQVTGL PDFSALVAAN
NASVVNVSAI VPLAAMPDTS NQGRNDSELN QFFRQFFGFN GPAPGGSTPQ EPTPPVEPES
SSGSGFVLSQ DGEIVTNEHV IDGASQIYVR LADGRELKAK VLGSDKAGDI ALLKIDAKGL
KPVKIGNSDQ VKPGQWAVAI GSPFGFDHSV TAGVVSAKGR SLPGDDNQRY VPYLQSDVAI
NPGSSGGPLF NVKGEVIGIN AQILTESGTY NGLSFSIPIN YALQVVEQLK QHGTVDRGFL
GVQIQSLNRE MAQAMGLDRA KGALVTGFVS GSPAEQSALQ PGDIIIAANG HPITESADLP
QTIGVLPPGS DVRLEVLTKG KTHNISIKLA ALPQHAPRQV QSMKSHDLIV EDFGLLLTDD
GGTIRVKAVE PNSPAARSGL AAQDILLTLN QRALNSLDAA QNAFESARKD RPNAVLMRRG
DQQHYIALSL QAD
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