Gene Hneap_1348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_1348 
Symbol 
ID8534504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp1460754 
End bp1461455 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content54% 
IMG OID646383739 
Productphosphoglycolate phosphatase 
Protein accessionYP_003263229 
Protein GI261855946 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATTTG ATACAAAGCT GCCTTCCAAC CAAACTCATC CTGTTCAAGG CGTGCTGTTC 
GACCTCGACG GGACACTGAT TGATACGGCA CCCGATATGG CACTTGCACT CAATCGCCTG
AGGTTGGAAT GTAACTTGCC CCCCATGCCT TTCGAGCAGA TTCGCCCGCA GGTATCCAAT
GGTGCGCGGG GCCTGCTGGA GATTGGCTTT CAACTCGGTC CGAATGATCA AGGATTCGCG
ATTCTTCGCG ATCGCTTCCT TCAACTCTAT CGGCAGGATA TCGCAGGAGA AACCCGCTTG
TTTGCGGGAT TCGATAAAGT GATCGACTGG TTGAATAAGC AAGAAATGCA TTGGGGCATC
GTGACCAACA AACCCGGTTT CCTGACTCGG GAACTGGTGA AGGAACTGGA CTTAAAGCCC
GCAGTTGTAA TTGCAGGAGA TGACTTACTC CGGCGCAAAC CCTATCCCGA TCAGCTCATT
TATGCTGCGG GGCAACTACG GCTGCCACCA CAACACATCC TGTATGTGGG CGACCATGAG
CGCGACATAC AAGCCAGCCG AGCCGCACAT ATGCCCTCCG CTGCCGTCCG CTGGGGTTAT
CTGGACGGCG AAAGGCCGAT CGAAGACTGG CTGGCCGATG TCATTCTGAC AAACCCCACT
GACTTGCTCG ACTTACTCTC ACCAACCCCT AATCCAAACT AA
 
Protein sequence
MRFDTKLPSN QTHPVQGVLF DLDGTLIDTA PDMALALNRL RLECNLPPMP FEQIRPQVSN 
GARGLLEIGF QLGPNDQGFA ILRDRFLQLY RQDIAGETRL FAGFDKVIDW LNKQEMHWGI
VTNKPGFLTR ELVKELDLKP AVVIAGDDLL RRKPYPDQLI YAAGQLRLPP QHILYVGDHE
RDIQASRAAH MPSAAVRWGY LDGERPIEDW LADVILTNPT DLLDLLSPTP NPN