| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1342 |
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| Symbol | |
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| ID | 8534498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 1454459 |
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| End bp | 1455259 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 646383733 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_003263223 |
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| Protein GI | 261855940 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00293598 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTCGACT CTGCACTATT CCATGACGTA ATCCAGCCCT GGCTGATCAA GATCGCGCTT
GCACTCGCCA TCGCCGTAGC AGGTTATTAC ATCAGTCGCT GGACCGTACC CTGGCTTGAA
CGCGTATTAC GGAGAACCCG CGTAGATATC ATGTTGATTG GCTTTATCGT CTCCATCGCT
CGAACCATTT TCCTGCTTTT CATTGCGGTC GCTGCCTTGT CTCAACTAGG ACTCGACACA
ACATCACTGG TAGCCCTCAT CGGCGCCGCC GGTATTGCCG TTGGTCTTGC GCTCAAGGAA
TCGCTGGGGA ATTTCGCCGC AGGGGTCATG ATTCTTATTT TTCGACCATT CAAGATCGGT
GACTTTGTCG ATGGCGCGAA TGTGATGGGC ACCATCAAAG AAATTGGTAT TTTCCAGACC
CGCATGACCG ATCCATCAAA CGTCGAAATC ATCGTGCCCA ATGCCACGAT ATACAACAGC
CCGATCAAAA ACTTCAGCAC CCACCCAACG CGTCGAATCG AAATTGCCGT TGGCATCGAT
TACGCGAACG ATCCAAGACA AGCAAAAGAA ATCATCACGT CGCTTTGTGC GGCAGACAGC
AGGATACTGC CCGAGCCCGC GCCGCTTGTG CTCGTCAATG ATTTTGGCGC GTCGAGTATC
GACTTGCTGA TTCGCGTTTG GGTTAATGCC AGCGACATAT TGGCGGTTCA AACGGAACTT
CGTGAGCAGA TCAAGCAACG GTTCGATGAA GAGAATATCG CCATCCCATT CCCACAAATG
GTACTGCGCC GACCCGAGTA A
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| Protein sequence | MFDSALFHDV IQPWLIKIAL ALAIAVAGYY ISRWTVPWLE RVLRRTRVDI MLIGFIVSIA
RTIFLLFIAV AALSQLGLDT TSLVALIGAA GIAVGLALKE SLGNFAAGVM ILIFRPFKIG
DFVDGANVMG TIKEIGIFQT RMTDPSNVEI IVPNATIYNS PIKNFSTHPT RRIEIAVGID
YANDPRQAKE IITSLCAADS RILPEPAPLV LVNDFGASSI DLLIRVWVNA SDILAVQTEL
REQIKQRFDE ENIAIPFPQM VLRRPE
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