| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1338 |
|---|
| Symbol | |
|---|
| ID | 8534494 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 1449219 |
|---|
| End bp | 1450310 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 646383729 |
|---|
| Product | phosphoserine aminotransferase |
|---|
| Protein accession | YP_003263219 |
|---|
| Protein GI | 261855936 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1932] Phosphoserine aminotransferase |
|---|
| TIGRFAM ID | [TIGR01364] phosphoserine aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.175355 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGAG TATTTAATTT TGGCGCAGGT CCTGCGACGT TACCTGAAGA TGTGTTGATT
CAAGCACGCG ACGAGATGTT GGATTGCGAT GGCACCGGTA TGTCCGTGAT GGAGATGAGC
CATCGCGGTA AAAAATTCGT TGCCATTGCT GAGCAGGCAG AAGCTGATCT TCGTCAGTTG
ATGTCGATTC CGGACAATTA CAAAGTGCTG TTCTTGCAGG GCGGGGCATC GGCCCAGTTT
GCCATGATCC CCATGAACCT GAAAGCTGCT CGTGGTGATG GTTCTGCCGA TTATCTGAAC
ACCGGTCACT GGTCCGAGAA AGCAATTGCT GAAGCGAAGC GCTTCCTGAA CGTCAACGTG
GTTGCCGATA CCAAGCCGAG CAAATACACC CTGTTGCCTG CAGCCGATGA GCTGAAGTTC
AACCCGAACG CTTCTTATGT TCACTACACA CCGAATGAAA CCATTGCGGG CGCCGAGTTC
GGTTACATTC CTGAAAGTGG TGACGTGCCT CTGGTTGCCG ATATGTCATC TACGATCCTC
TCGCGTCCTG TGGACGTTTC TAAGTTCGGC ATTATCTATG CCGGTGCGCA AAAAAACATT
GGTCCATCCG GTTTAACGAT CGCCATCGTT CGTGATGATC TGATCGGCCA TGCGGGTGCC
GACGTGCCTG CCATGTTCGA CTACAAAATC CACGCCGATA ACGGTTCGAT GTACAACACG
CCGCCCACCT ATGCCTGGTA CATCGCCGGT CTGGTATTCA AGCGCCTGCT GGCGAATGGT
GGCTTGGAGC AAATGAAGCA AATTAACGAG CGCAAGGCCA ACAAGCTCTA TGCTGCCATC
GATCAGAGTG GCGGTTTCTA TCGCAATCCG GTGGCGCTCA ATGCCCGTTC CTGGATGAAT
ATCCCCTTCA TCCTCAAGGA TGATGCGCTG GATAAACCAT TCCTTGCCGA GGCTGACAAG
GCCGGTCTTT CTGCACTGGC CGGTCACCGT TCCGTCGGTG GGATGCGTGC AAGTATTTAT
AACGCCATGC CTGAAGCCGG TATCGACGCA CTGATCGCGT TTATGCACGA TTTCGCTCAG
CGCCACGGTT AA
|
|---|
| Protein sequence | MARVFNFGAG PATLPEDVLI QARDEMLDCD GTGMSVMEMS HRGKKFVAIA EQAEADLRQL
MSIPDNYKVL FLQGGASAQF AMIPMNLKAA RGDGSADYLN TGHWSEKAIA EAKRFLNVNV
VADTKPSKYT LLPAADELKF NPNASYVHYT PNETIAGAEF GYIPESGDVP LVADMSSTIL
SRPVDVSKFG IIYAGAQKNI GPSGLTIAIV RDDLIGHAGA DVPAMFDYKI HADNGSMYNT
PPTYAWYIAG LVFKRLLANG GLEQMKQINE RKANKLYAAI DQSGGFYRNP VALNARSWMN
IPFILKDDAL DKPFLAEADK AGLSALAGHR SVGGMRASIY NAMPEAGIDA LIAFMHDFAQ
RHG
|
|---|
| |