| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1327 |
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| Symbol | |
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| ID | 8534483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 1438030 |
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| End bp | 1439565 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 646383719 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_003263209 |
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| Protein GI | 261855926 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.566975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTCAAC CTGAACCAAC ACGAACGCCC CAAAAGCAGC CCTGGTGGCT TAGGATTCTG
GGTGTATCCG CGCTGGTTGG CGCACCGCTG ATCTGGTGGC TAAATGCTTA TCCACCCGCC
CCCTATGGCA CGACAGCCAT GGACGAACGT ATCACCCGTT CATTTGAACA AACACCCCAG
CTTGAACAGG TTCGTAACCG TGGCTACCTC AGAGTCGCTA CGCTGATCAG CCCCACCATC
TATGTCCCCG ACAAGAATCA GACTCAAGGT CTGGAATACG ACCTTGTGAC GCGGTTTGCT
GCAAGTTTAG GACTGGGTGT TCGATTTATC ATCGCCAAGA ACATCGATAA TGCCTATAAA
CTCGTCGCCG AAGACAAAGC CGATTTCGCA GCAGCCGGTC TCGTGGTCAA TCTCGCCCGA
GAGAACAAAT TTCGCTACGG CCCGAGTTAT CTATCCGTTC GGCGACAACT CATTTATCGA
CAAGGCGTAG ATAAACCCAA AAATCTTCAG GATATCGGCA ACGCAACGCT TGCAGTCGAA
CAGGGCTCCA GTAATCAGCA TTGGCTTGAT GAGCGCACTA AGGGTGGCGT GCTCGACATT
TCACCGAACG ATGTGCCCGA TTCATCTGAT CTCACCCCAC CTGATGACGG CTACGCGATC
CGCATCAAAT TAGAAGAAAG CAGTCTCGGT ACACTGGAGG CGCTGGAGAA TGGTACGGTC
GATTACGGCA TTGTGTTGTC GCATGAAGCG ATGCTCGGGC AGAAATTATC GGACAAGATC
AAGGTGGCAA CCGATCTTGG GCCTCCCGTA TCTTTTGCGT GGGCCTTTTC CCGTCTTGCC
GATGAATCTC TACTGGACAA AGCACGCCAG TTTTTCGCTT CCATACGTGC CAACAATGAA
CTCAAGAATC TGATCGATCG TCATTACGCC CAATTCGAGC AACTCGATCA ACAATTGGCA
CAACAATTCA TCGAAGATGT GGACAAGCGT ATTTCACCTT ATCTGGCCGC ATTCAAGGCC
GCGGGGAAGA AATACGACAT TGACTGGCGA TTGCTGGCGG CGATGGCGTA TCAGGAATCG
AAATGGGACC CTGAGGCACG CTCCCATATG GGCGCATACG GCATCATGCA GATCACGGCG
CCTACCGCAC AGGATATCGG TTTGATTGAC CCGGCCAATC CAGTGAAGAA CATCATGGCA
GCCGCCAAAT ACCTGGACCA ACTCCGTGCA CTCATACCGG ATAACGCGAA GGAGCCTGAC
CGTACCTATC TTGCCATGGC CGCCTATAAC GTAGGTATCG GCCATCTGAC CGATGCCATC
AAGTTGACCA AAATACAGGG CGGTGATCCC AACCGGTGGC GAGACATCCG TGAACGACTG
GCTCTTTTAT CTAATCCAAA GTATTACCGG AAGTTACGCA ACGGCTATGC CCGCGGGGAA
GAGACGATCC AATATGTCGA GAACATTCGT GCATTGCACG ATCTTATGAT CTGGGTCGAA
ACCCAACACA ACCTCATACG AGACGCAAAA CACTAG
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| Protein sequence | MTQPEPTRTP QKQPWWLRIL GVSALVGAPL IWWLNAYPPA PYGTTAMDER ITRSFEQTPQ
LEQVRNRGYL RVATLISPTI YVPDKNQTQG LEYDLVTRFA ASLGLGVRFI IAKNIDNAYK
LVAEDKADFA AAGLVVNLAR ENKFRYGPSY LSVRRQLIYR QGVDKPKNLQ DIGNATLAVE
QGSSNQHWLD ERTKGGVLDI SPNDVPDSSD LTPPDDGYAI RIKLEESSLG TLEALENGTV
DYGIVLSHEA MLGQKLSDKI KVATDLGPPV SFAWAFSRLA DESLLDKARQ FFASIRANNE
LKNLIDRHYA QFEQLDQQLA QQFIEDVDKR ISPYLAAFKA AGKKYDIDWR LLAAMAYQES
KWDPEARSHM GAYGIMQITA PTAQDIGLID PANPVKNIMA AAKYLDQLRA LIPDNAKEPD
RTYLAMAAYN VGIGHLTDAI KLTKIQGGDP NRWRDIRERL ALLSNPKYYR KLRNGYARGE
ETIQYVENIR ALHDLMIWVE TQHNLIRDAK H
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