Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1315 |
Symbol | |
ID | 8534471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 1425349 |
End bp | 1427748 |
Gene Length | 2400 bp |
Protein Length | 799 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 646383707 |
Product | phenylalanyl-tRNA synthetase, beta subunit |
Protein accession | YP_003263197 |
Protein GI | 261855914 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGATTTT CTGAATCTTG GTTGCGCGAA TGGATTAATC CGCCGGTTGA TACGACCACC CTGGCTCACC GTCTGACGAT GGCAGGGCTC GAAGTCGATG CCATTGAGCC GGCAGCGGAA TCGTTTAGCG GCGTTGTGGT TGCCGATGTG CGCTCCGTTG AGCCGCATCC GGATGCGGAC AAGCTCAAAA TTACCCGTGT CACCGATGGC AACAACGAGT ACCAGATCGT TTGTGGCGCT TCCAATGTTC GTGTGGGTAT GCGTGTGCCG TTGGCGACAT TAGGCGCACG GTTGCCCGGT GGTTTGGTTA TCAAATCGGC CAAGCTACGC GGTATTCCTT CCGAGGGCAT GTTGTGCGGG GCGAGCGAGC TGGGCATACC CAGTGTCGTC GACGGATTGT GGGAATTGCC CTCGGATGCA CCATTGGGAC AATCGATTCG CGACTGGCTG AATCTGGATG ACTCCGTGAT CGAGTTAGGG ATAACCCCCA ACCGGGGTGA TGCGCTGTCG ATTTTGGGTA TTGCCCGTGA TTGTTCGGCA TTGTTCGATA TGGATCTCAC ACTGTGTGAT CAATCCTCAG CCGTTCAGGT TACCTCGGAT GCCATTCAGC CCGCTCAAAT CGACGCACCC GATGATTGCC CGGTTTATTT GACCCAGGTT ATTTCAGGTG TGTCTGTGGA GCGCCGAACA CCAATGTGGA TGTCCGAACG CCTGCGTCGT GCCGGGATCA AGGTGATCGA GCCGATTGTG GACATTTGCA ACTATGTCAT GCTTGAGTTG GGGCAGCCTT TACATGCCTT CGATCAACAA AAGCTGCATG GCGGCTTGAC GGTACGTCAT GCGCGTCCGG GTGAAACCAT GGATGCGCTC AATCAGCAAA AGCTTGAATT GGATGCCGAT TGTCTTGTGA TCGCCGATGC TGCTGGGCCC GTCGCACTTG CCGGTATTAT CGGTGGTTTG GGCTCGGCCG TATCCTCTGA AACAGTGAGC ATCGTTCTTG AATCGGCCCA TTTCACACCC GAAGTGATTG CGGGTCGAGC GCGTCGTCTG GGTTTGACTA CCGATGCGGC ATTTCGTTTC GAGCGGGGTG TCGATCCTTT GTTGCCCGAA CGTGCCTTGT CGCGTGCGGC CGCTTTGATT CAGCAAATCT GTGGTGGTCA GGCAGGACCG GCGAGCGCCG CTCAGGGCGC ACAAGCGCCT CGATTGCCTG CGGTCATTGT GCTGGATATG GATTGGGCTG AGCGACGCTT GGGCTTGGCT ATTCCGCCAG AGCAAGCCAG AACATTCCTC GTGCGTTTGG GCTGCATCGT TGAATTTCAA TCTGAAACAA TATTGACAGT AACCCCGCCA AGTCATCGTT TCGACATGGT GATTGCTGAG GATTTGCTTG AGGAATTGGC GCGACTGCTT GGTTTTGATG CGTTTCGTGC GCCCATGGGA CGTTCGCCTT TGACAATTGG TGTCCGGCCG GAAACCGAAA ACAGCTTCGC AAAAGTGGCC GACTTTATGG CGAGCCGAGG TTATTTTGAA GCGATTTCGT ATAGCTTCAT CGATCCGGTC GTTGCAGAAC TGTTCTCTTC TGAACCAAGT ATTACACTCG CGAACCCGAT TTCCAGCGAG ATGGCCGTCA TGCGTCAAAG CCTGTGGCCG GGCTTGTTGC AGGCCGTGGC CTTCAACCAG AATCGTCAGC AGTCGCGTGT CCGTTTGTTC GAGTTGGGCA GAAGCTTTAA GGGCTCTCTT GATAATGTCC AGGAAATTGA TCAACTCGCA GCTGTGATGG TTGGTGGTCG TTGGCCGGAG CAATGGGCTG AAAAAAGCGC TCAAGTAGAT TTCTTCGACC TCAAGGGTGA TTGTGAGGCG CTTTTACTGC ATCTTGGATT CAGCATTGAC GCCACTTCCG AGCATCCAGC CAACGTCAGA TTCCAAGCCG CGGCCCACCC GGCATTGCAT CCTGGTCAAA CTGCAGAAAT CCTGATTCAC GACCGCCCTT GTGGTTGGTT GGGTGCCATT CATCCTGACA TAGCAGAAAA AATGGACGTG AATGGATCGG TTTTTGTCCT GGAACTTGAT CTTCATGCCC TGCAAAACCG GCATTTGCCG ATGAATAAGC CGCGCTCGCG TTTCCCGCAA GTTCGACGGG ATCTGGCTTT ACTCAAGCCA GCCACTTTGC CGATTTCCGA ATTGTTATCC CTCATTAAGA AGGACAGCCC GGCGAGTTTG CGTGAGGTTG GGATCTTTGA TCGCTACGTC GGCACCGGTA TTGAACCTGG GTTTGAGAGC GTTGCGGTCA AATTAATTTT CCAGGAATCC GAACGCACGC TGACGGATGA TGAAATTGTC GGTATAATCA GCGACATACG CGCAAAGCTT GCGCAGAAAA ACATTCAATT GCGCACCTAA
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Protein sequence | MRFSESWLRE WINPPVDTTT LAHRLTMAGL EVDAIEPAAE SFSGVVVADV RSVEPHPDAD KLKITRVTDG NNEYQIVCGA SNVRVGMRVP LATLGARLPG GLVIKSAKLR GIPSEGMLCG ASELGIPSVV DGLWELPSDA PLGQSIRDWL NLDDSVIELG ITPNRGDALS ILGIARDCSA LFDMDLTLCD QSSAVQVTSD AIQPAQIDAP DDCPVYLTQV ISGVSVERRT PMWMSERLRR AGIKVIEPIV DICNYVMLEL GQPLHAFDQQ KLHGGLTVRH ARPGETMDAL NQQKLELDAD CLVIADAAGP VALAGIIGGL GSAVSSETVS IVLESAHFTP EVIAGRARRL GLTTDAAFRF ERGVDPLLPE RALSRAAALI QQICGGQAGP ASAAQGAQAP RLPAVIVLDM DWAERRLGLA IPPEQARTFL VRLGCIVEFQ SETILTVTPP SHRFDMVIAE DLLEELARLL GFDAFRAPMG RSPLTIGVRP ETENSFAKVA DFMASRGYFE AISYSFIDPV VAELFSSEPS ITLANPISSE MAVMRQSLWP GLLQAVAFNQ NRQQSRVRLF ELGRSFKGSL DNVQEIDQLA AVMVGGRWPE QWAEKSAQVD FFDLKGDCEA LLLHLGFSID ATSEHPANVR FQAAAHPALH PGQTAEILIH DRPCGWLGAI HPDIAEKMDV NGSVFVLELD LHALQNRHLP MNKPRSRFPQ VRRDLALLKP ATLPISELLS LIKKDSPASL REVGIFDRYV GTGIEPGFES VAVKLIFQES ERTLTDDEIV GIISDIRAKL AQKNIQLRT
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