Gene Hneap_1315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_1315 
Symbol 
ID8534471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp1425349 
End bp1427748 
Gene Length2400 bp 
Protein Length799 aa 
Translation table11 
GC content54% 
IMG OID646383707 
Productphenylalanyl-tRNA synthetase, beta subunit 
Protein accessionYP_003263197 
Protein GI261855914 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0072] Phenylalanyl-tRNA synthetase beta subunit 
TIGRFAM ID[TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGATTTT CTGAATCTTG GTTGCGCGAA TGGATTAATC CGCCGGTTGA TACGACCACC 
CTGGCTCACC GTCTGACGAT GGCAGGGCTC GAAGTCGATG CCATTGAGCC GGCAGCGGAA
TCGTTTAGCG GCGTTGTGGT TGCCGATGTG CGCTCCGTTG AGCCGCATCC GGATGCGGAC
AAGCTCAAAA TTACCCGTGT CACCGATGGC AACAACGAGT ACCAGATCGT TTGTGGCGCT
TCCAATGTTC GTGTGGGTAT GCGTGTGCCG TTGGCGACAT TAGGCGCACG GTTGCCCGGT
GGTTTGGTTA TCAAATCGGC CAAGCTACGC GGTATTCCTT CCGAGGGCAT GTTGTGCGGG
GCGAGCGAGC TGGGCATACC CAGTGTCGTC GACGGATTGT GGGAATTGCC CTCGGATGCA
CCATTGGGAC AATCGATTCG CGACTGGCTG AATCTGGATG ACTCCGTGAT CGAGTTAGGG
ATAACCCCCA ACCGGGGTGA TGCGCTGTCG ATTTTGGGTA TTGCCCGTGA TTGTTCGGCA
TTGTTCGATA TGGATCTCAC ACTGTGTGAT CAATCCTCAG CCGTTCAGGT TACCTCGGAT
GCCATTCAGC CCGCTCAAAT CGACGCACCC GATGATTGCC CGGTTTATTT GACCCAGGTT
ATTTCAGGTG TGTCTGTGGA GCGCCGAACA CCAATGTGGA TGTCCGAACG CCTGCGTCGT
GCCGGGATCA AGGTGATCGA GCCGATTGTG GACATTTGCA ACTATGTCAT GCTTGAGTTG
GGGCAGCCTT TACATGCCTT CGATCAACAA AAGCTGCATG GCGGCTTGAC GGTACGTCAT
GCGCGTCCGG GTGAAACCAT GGATGCGCTC AATCAGCAAA AGCTTGAATT GGATGCCGAT
TGTCTTGTGA TCGCCGATGC TGCTGGGCCC GTCGCACTTG CCGGTATTAT CGGTGGTTTG
GGCTCGGCCG TATCCTCTGA AACAGTGAGC ATCGTTCTTG AATCGGCCCA TTTCACACCC
GAAGTGATTG CGGGTCGAGC GCGTCGTCTG GGTTTGACTA CCGATGCGGC ATTTCGTTTC
GAGCGGGGTG TCGATCCTTT GTTGCCCGAA CGTGCCTTGT CGCGTGCGGC CGCTTTGATT
CAGCAAATCT GTGGTGGTCA GGCAGGACCG GCGAGCGCCG CTCAGGGCGC ACAAGCGCCT
CGATTGCCTG CGGTCATTGT GCTGGATATG GATTGGGCTG AGCGACGCTT GGGCTTGGCT
ATTCCGCCAG AGCAAGCCAG AACATTCCTC GTGCGTTTGG GCTGCATCGT TGAATTTCAA
TCTGAAACAA TATTGACAGT AACCCCGCCA AGTCATCGTT TCGACATGGT GATTGCTGAG
GATTTGCTTG AGGAATTGGC GCGACTGCTT GGTTTTGATG CGTTTCGTGC GCCCATGGGA
CGTTCGCCTT TGACAATTGG TGTCCGGCCG GAAACCGAAA ACAGCTTCGC AAAAGTGGCC
GACTTTATGG CGAGCCGAGG TTATTTTGAA GCGATTTCGT ATAGCTTCAT CGATCCGGTC
GTTGCAGAAC TGTTCTCTTC TGAACCAAGT ATTACACTCG CGAACCCGAT TTCCAGCGAG
ATGGCCGTCA TGCGTCAAAG CCTGTGGCCG GGCTTGTTGC AGGCCGTGGC CTTCAACCAG
AATCGTCAGC AGTCGCGTGT CCGTTTGTTC GAGTTGGGCA GAAGCTTTAA GGGCTCTCTT
GATAATGTCC AGGAAATTGA TCAACTCGCA GCTGTGATGG TTGGTGGTCG TTGGCCGGAG
CAATGGGCTG AAAAAAGCGC TCAAGTAGAT TTCTTCGACC TCAAGGGTGA TTGTGAGGCG
CTTTTACTGC ATCTTGGATT CAGCATTGAC GCCACTTCCG AGCATCCAGC CAACGTCAGA
TTCCAAGCCG CGGCCCACCC GGCATTGCAT CCTGGTCAAA CTGCAGAAAT CCTGATTCAC
GACCGCCCTT GTGGTTGGTT GGGTGCCATT CATCCTGACA TAGCAGAAAA AATGGACGTG
AATGGATCGG TTTTTGTCCT GGAACTTGAT CTTCATGCCC TGCAAAACCG GCATTTGCCG
ATGAATAAGC CGCGCTCGCG TTTCCCGCAA GTTCGACGGG ATCTGGCTTT ACTCAAGCCA
GCCACTTTGC CGATTTCCGA ATTGTTATCC CTCATTAAGA AGGACAGCCC GGCGAGTTTG
CGTGAGGTTG GGATCTTTGA TCGCTACGTC GGCACCGGTA TTGAACCTGG GTTTGAGAGC
GTTGCGGTCA AATTAATTTT CCAGGAATCC GAACGCACGC TGACGGATGA TGAAATTGTC
GGTATAATCA GCGACATACG CGCAAAGCTT GCGCAGAAAA ACATTCAATT GCGCACCTAA
 
Protein sequence
MRFSESWLRE WINPPVDTTT LAHRLTMAGL EVDAIEPAAE SFSGVVVADV RSVEPHPDAD 
KLKITRVTDG NNEYQIVCGA SNVRVGMRVP LATLGARLPG GLVIKSAKLR GIPSEGMLCG
ASELGIPSVV DGLWELPSDA PLGQSIRDWL NLDDSVIELG ITPNRGDALS ILGIARDCSA
LFDMDLTLCD QSSAVQVTSD AIQPAQIDAP DDCPVYLTQV ISGVSVERRT PMWMSERLRR
AGIKVIEPIV DICNYVMLEL GQPLHAFDQQ KLHGGLTVRH ARPGETMDAL NQQKLELDAD
CLVIADAAGP VALAGIIGGL GSAVSSETVS IVLESAHFTP EVIAGRARRL GLTTDAAFRF
ERGVDPLLPE RALSRAAALI QQICGGQAGP ASAAQGAQAP RLPAVIVLDM DWAERRLGLA
IPPEQARTFL VRLGCIVEFQ SETILTVTPP SHRFDMVIAE DLLEELARLL GFDAFRAPMG
RSPLTIGVRP ETENSFAKVA DFMASRGYFE AISYSFIDPV VAELFSSEPS ITLANPISSE
MAVMRQSLWP GLLQAVAFNQ NRQQSRVRLF ELGRSFKGSL DNVQEIDQLA AVMVGGRWPE
QWAEKSAQVD FFDLKGDCEA LLLHLGFSID ATSEHPANVR FQAAAHPALH PGQTAEILIH
DRPCGWLGAI HPDIAEKMDV NGSVFVLELD LHALQNRHLP MNKPRSRFPQ VRRDLALLKP
ATLPISELLS LIKKDSPASL REVGIFDRYV GTGIEPGFES VAVKLIFQES ERTLTDDEIV
GIISDIRAKL AQKNIQLRT