| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1310 |
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| Symbol | |
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| ID | 8534466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1420740 |
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| End bp | 1421543 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 646383702 |
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| Product | 20S proteasome, A and B subunits |
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| Protein accession | YP_003263192 |
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| Protein GI | 261855909 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3484] Predicted proteasome-type protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.415114 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTTATT GTGTTGCACT CAAACTCAAT GCAGGGCTTG TCTTCGCCTC CGATTCACGT
ACGAATGCGG GCATCGATCA GATTTCCAGC TTCAAGAAAA TGCGTACCTT CGTGAATCGG
GGTGACCGCG TCATTGTGAT ATTGAGCTCA GGCAATTTGT CCATCACACA AAATGCCATC
AACCAGTTGG AAACACAGGG CCGCAGTCCA GAGCAACAGA ATATCTGGAA CGCTACATCC
ATGTTCGACG TGGCCTCTTT GCTGGGCGGC TGTTTACGGC ATGTGCAAAA CACAGACCGT
CCGTTCCTGA TGGCGGGCAA CATTGATGTC AGTGCCAATT TCATTGTCGG CGGGCAAATT
GCTGGCGAGC CGCCGCGTTT GTTTCTGGTG TACTCCGAAG GCAACTTTAT TGAAGCGACC
GAAAACACGC CGTTCTTTCA GATTGGAGAG ATCAAGTACG GCAAACCGAT CATTGACCGG
ATCATCAACT CAGAAACCAC CCTCAACAGG GCAATCAAAT GCCTGTTGGT CTCTTTTGAT
TCAACCATGC GCAGTAACGT CTCCGTAGGC ATGCCAATCG ACATGGCTTG TTATATGACC
GATAGCCTGT CGCTGGACAA CATCAAGCAG ATGCAGGAAG GCGACCCTTA TTTCACGTCA
ATCAGTTCAA AGTGGAGTGA AGGGCTAAAT AGCGTATTCA CCCAGTTGCC CAATCCGGAG
TGGGCATGTC AGACACCGGA CGCAGAGCCG GCTCAAACTC CGTCAGACGG TCAATTACAA
AATCAAGGGA TACCGCCCAT ATGA
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| Protein sequence | MTYCVALKLN AGLVFASDSR TNAGIDQISS FKKMRTFVNR GDRVIVILSS GNLSITQNAI
NQLETQGRSP EQQNIWNATS MFDVASLLGG CLRHVQNTDR PFLMAGNIDV SANFIVGGQI
AGEPPRLFLV YSEGNFIEAT ENTPFFQIGE IKYGKPIIDR IINSETTLNR AIKCLLVSFD
STMRSNVSVG MPIDMACYMT DSLSLDNIKQ MQEGDPYFTS ISSKWSEGLN SVFTQLPNPE
WACQTPDAEP AQTPSDGQLQ NQGIPPI
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