| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1304 |
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| Symbol | |
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| ID | 8534460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 1411644 |
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| End bp | 1412345 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 646383696 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003263186 |
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| Protein GI | 261855903 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.324723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAACC AGCCAAAAAA TATTGCCGTT GTGGGTGCTT CGAGTGCCAT CGCTGAGGCA
TTCATTCGTT GCGTTCAGAT ACGTTACCCC AATGCGGTTG TGCACGCGTT TTCGCGACAA
GGCGATCGAC CCATCGACTA TAGTCAGGAA GAAAGCATCG CGCTGGCCGC GGAACACGCC
AGCCGGACGG GCCCGCTGGA TGGGGTGTTC GTGGCCAACG GCATATTGCA CGATGGACGG
GTTGCCCCGG AAAAATCATT AGGGCAATTG TCACGCGATC ATTTTCAGCA TGTGTTCGAG
ATCAACACCG TCGTTCCTGC GCTTGTCGCC AAGCATTTCT TGCCCGTACT CAATCGCCAG
CGCCCCGCTT ATTTTGCGGT GCTCTCGGCG CGTGTCGGCA GTATTTCCGA CAACCAATTG
GGTGGCTGGT ATGCGTACCG CGCATCCAAG GCGGCTTTGA ACATGCTGAT CAAAACGGCG
GCGATCGAGG TGGCACGGCG CAACAAACAG GCAATCGTCG TTGCGCTCGA TCCGGGAACC
GTCGACAGCC CGCTTTCCCG ACCGTTTCAA CGCAATGTGC CCAGCCATAA ACTGTTCACT
CCCGATCTGG CCGCTGACCA ACTGCTGAAT GTTCTCGAGC ACCTGACACC GGCGCAGACA
GGTCGGTTCA TTGGTTGGGA TGGTGAGGAG ATATTGCCGT GA
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| Protein sequence | MSNQPKNIAV VGASSAIAEA FIRCVQIRYP NAVVHAFSRQ GDRPIDYSQE ESIALAAEHA
SRTGPLDGVF VANGILHDGR VAPEKSLGQL SRDHFQHVFE INTVVPALVA KHFLPVLNRQ
RPAYFAVLSA RVGSISDNQL GGWYAYRASK AALNMLIKTA AIEVARRNKQ AIVVALDPGT
VDSPLSRPFQ RNVPSHKLFT PDLAADQLLN VLEHLTPAQT GRFIGWDGEE ILP
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