| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1300 |
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| Symbol | |
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| ID | 8534454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1408547 |
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| End bp | 1409203 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 646383690 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_003263182 |
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| Protein GI | 261855899 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0023245 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGGATT GCCAAATCAA ATATAGTTTC AACCGGCGGG TGGTGGGAGT AATTTTTTCC
TTCGGCCTTC TGATGACTGT GGCATGTTCT ACGGCGACAG CGGATGTGTA TGTGCTTCGG
GATGCCAATG GTGTGGCGCA TCTGACAAAC GTGACCCCAA AAAAACATTC TGGCTATACG
CTGTTTCAGA AAAGTGCATG GACAGCGCCC AAGGCTTGGC ACGATGGTTT CAAGATCCTG
CCACGCTTGA ATGTTCACAC CTACGACGAT GAAATCAGAC ATTACGCCAA GCAGTTCGGC
GTTGATCCAA CGCTGGTGCG TGCCGTTATG CATGCTGAAA GTGCGTTCAA CCCCAACGCA
GTGTCTTCTG CGGGCGCGGG TGGATTGATG CAGTTGATGC CGCAAACGGC AGAACGATTC
GGTGTTGCCG ACCGGTTCAA CCCCGAGGAA AACATTGCCG GCGGTGTTGC TTATCTTGCC
TTCTTGCTTG ATTTGTTCCA CGGTGATCGG CAACTGGCGG TAGCGGCCTA CAATGCAGGC
GAAGGCGCGG TGCAAAAGTA TTCTGGCGTG CCGCCATACA ACGAAACACA AAACTATGTG
ACGCGCGTGC TCGATTTACA GAAGCGTTAT GTGGCCAAGG CGGAGCAATC CCAATAG
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| Protein sequence | MMDCQIKYSF NRRVVGVIFS FGLLMTVACS TATADVYVLR DANGVAHLTN VTPKKHSGYT
LFQKSAWTAP KAWHDGFKIL PRLNVHTYDD EIRHYAKQFG VDPTLVRAVM HAESAFNPNA
VSSAGAGGLM QLMPQTAERF GVADRFNPEE NIAGGVAYLA FLLDLFHGDR QLAVAAYNAG
EGAVQKYSGV PPYNETQNYV TRVLDLQKRY VAKAEQSQ
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