| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1293 |
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| Symbol | |
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| ID | 8534447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 1399404 |
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| End bp | 1401092 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 646383683 |
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| Product | ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC |
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| Protein accession | YP_003263175 |
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| Protein GI | 261855892 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components |
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| TIGRFAM ID | [TIGR02868] thiol reductant ABC exporter, CydC subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.408226 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCGCG AACAAAAGCA AATACCAAAG CATAGTGAAT GGCGCTGGCT TTATGAAATC
AGTCGCCCGT ATCTTGGCTG GATGATGGCT GGTGTTCTGC TTGCCACCAC GGTTATTCTC
GCCAATGTGG CTTTACTCTC CGTGTCCGGC TGGTTCATTA CCGCCATGGC AATCAGCGGA
CTAACTGGCG CAGTCATCAA TTACTTCACG CCGGCAGCGG CCATCCGCGG TTTGGCAATT
TTGCGTACCG TGGGCAGATA TCTCGAACGA TTGATCACCC ATGAGGCCAC ATTCCGGCTC
CTCGCCGGCT TGCGTCAATG GTTCTTCGAA CGTTTGGAAC CATTGGCACC GGCTCGCCTT
CAGTATTATC AGGGCGGGGA TTTGCTGAGC CGAATTCGTG CCGACATCGA TAGCCTCGAA
AATGCGTATT TGCGCATCGT TACCCCTACG CTTGCCGCCC TGCTCTCCAC CGTGCTGATG
GTTCTGTTCT TGTTGTGGTG GAGCCCTGCT ATTGCACTGA CAAACCTTAT TGGCCTGATG
ATCGTCGGCT TGATTTTGCC TTGGTTGGCG CTGCATCTGG GCATGAACAG TGGTAAACAG
ATTGTCGAGG CGCGTGCGGC CTTGCGTCAA CGGACCAGCG AAACCGTGCG CGGTCTGGCC
GAAATCACAC TCTACGGCGA TCCGCAACAA CGCATCGATA CCATTCACAA GGAGAACAGC
GCGCTGGTCG TGCCCCAGAG ACAGCAAAAC CGCATCGATG CCGGCAGTAC GGCCCTGACA
GGTCTATTCA GCCAACTGAC CTGGCTCACC ATGATTGTCA TAGCCATAGG TCTTGTTCAG
AACGGAATGC TTAACGGACC GGAACTGGTG ATGCTGGCAT TCTTCGGCAT GGCCAGCTTT
GAGGCAGTCG CCGCCTTGCC CATTGCCTTT CGCGCCCTCG GGGAAACACG CAGCGCCGCT
GGCCGGATTT TGGATCTGGT CGATGCTGAA CCTGAGGTGA TCGAACCAAT CGAACCTTCG
GCCGCGCCAC AGCGCTTCGA CATACGATTC GACAAGGTGT GCCTCACCTA CCCCGGAAAC
AAACAACCCG CGCTGCACGA TGTCAGCTTC CACCTTAAAC AGGGACAGAA ACTCGCCATC
CGAGGTGCCA GTGGCTCCGG CAAAACCAGT TTGACCCAGC TAATACTCAA GTTCTGGGCA
CCCGACTCCG GTCAGATCAG CATTGGCGAG ACAAATCTTT GTGATCTGAG TGGCGACAGT
GTTCGAGCGC TCTGTGCTGT TGTCAGTCAG CACGTTCATC TGTTCAACAC GACCTTGGCT
GCAAATTTAT ACCTCGCCAA ACCTAATGCC ACGCAGGAAG ACCTGGTGAG TGCTTGCCGA
GCAGCTTCGA TCCTCGACGA TATCCTCGCC TTGCCTGAAG GTTTCAACAC AGTAGTTGGT
GAAGCCGCCG CTCGACTATC AGGCGGTCAA ATCAGACGCA TCAGCATCGC CCGAGCTTTA
TTGAAGGATG CGCCCATCGT GATTCTTGAC GAACCCACAG AAGGCCTTGA TGCCAAAACA
GAACAGGCAG TCACGAAAGC ATTGGCTTGG CTACTGCAGG ATCGGACAGC GTTAATTATT
TCTCATCGCC CCCAACTACT TACGCTCGCC GATCAGACAA TCGTGCTGGA TGCAGGAAGC
ATCATTTAA
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| Protein sequence | MSREQKQIPK HSEWRWLYEI SRPYLGWMMA GVLLATTVIL ANVALLSVSG WFITAMAISG
LTGAVINYFT PAAAIRGLAI LRTVGRYLER LITHEATFRL LAGLRQWFFE RLEPLAPARL
QYYQGGDLLS RIRADIDSLE NAYLRIVTPT LAALLSTVLM VLFLLWWSPA IALTNLIGLM
IVGLILPWLA LHLGMNSGKQ IVEARAALRQ RTSETVRGLA EITLYGDPQQ RIDTIHKENS
ALVVPQRQQN RIDAGSTALT GLFSQLTWLT MIVIAIGLVQ NGMLNGPELV MLAFFGMASF
EAVAALPIAF RALGETRSAA GRILDLVDAE PEVIEPIEPS AAPQRFDIRF DKVCLTYPGN
KQPALHDVSF HLKQGQKLAI RGASGSGKTS LTQLILKFWA PDSGQISIGE TNLCDLSGDS
VRALCAVVSQ HVHLFNTTLA ANLYLAKPNA TQEDLVSACR AASILDDILA LPEGFNTVVG
EAAARLSGGQ IRRISIARAL LKDAPIVILD EPTEGLDAKT EQAVTKALAW LLQDRTALII
SHRPQLLTLA DQTIVLDAGS II
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