Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1292 |
Symbol | |
ID | 8534446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 1397635 |
End bp | 1399407 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 646383682 |
Product | ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD |
Protein accession | YP_003263174 |
Protein GI | 261855891 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAATC CTGCCGCGAT GCAAGACAAG GAACAGATCC GCCAACTGGA TCGATGGCTA AGAAGTCAGG CAAAAACGGT AAAACGGCCC CTGAATACAG CCGTTCTGCT CGGCAGTGTG AATGGTTTTT TACTGATTGC CCAATGCTGG ATGCTGGCTC AGGTGCTAAA TGCAACTGCG ATCGGCCACC AACCGATTAC TGCAGTCTGG GGATATCTGG CAGGCATGAT CGGACTTTTT CTGCTGCGAG CCGGGGTAAA TTACGGTAGC CAGCGGTTCA CCTTCGAAGC CGGTGCCCGC CTGCGCACCG AACTCAGAGC CAGTATCTTC GATCACATCC ATGCACTCGG CCCGGCATGG AGTCGTGATC AACGCTCGGG AGCACGCGCA ACCGAGGTAG TGGATGGCGT CGAAGCACTG GATAAATATT TCAGTCTTTA TCTGCCACAA ATGCAGCTCG CCATTATTAT TCCTGCGGCG ATCCTGGTTT TTGTCTTCCC GTTCGATTGG ATATCCGGAC TGATTCTGTC CATCACGGCA CCTTTGCTTC CCGTATTCAT GATCATCATC GGCAGTCAGA CCGAAAAACT AAATCAGGCG CAGTGGCAAA GTTTGTCTCG CATGGGGGCA CACTTTTTCG ACATGATCGA GGGACTGACG ACACTCAAGC TGTTTAATGC CGCCCAGCGT GAAGCCCGTT TTATCGGTCA GATCGCAGAA GACTACCGCC TGCAAACCAT GAAGGTGTTG CGCGTCGCCT TTCTCTCTTC GATGGTGCTT GAATTTCTGG CTGCCATCAG CATCGCCATG GTGGCTGTTT ATGTCGGCTT TCGATTGATG TACGGCGACA TCCATTATCT CAACGGCATT TTCGTGCTCT TGCTTGCGCC GGAGTTCTAT CTCCCCTTGC GCAGCATGGG AACGCAATTT CACGCGCGAA TGGATGCACT GGGCGCCGTG GAGCCGATTA TTGAACTCTT GAATACGCAG CCATCCACCA AGCCGACTGG TGAAATTGAG CTGAAACCGG AACATGCGCC TCAGATTACC TTTTCCCATC TCGACTTTGC CTACCCAAAT CGGGACGCAG TCATAAGTGG CCTTAACCTC GATTTACGAG CGGGCACGCA CACGGCACTC ATCGGCGCGA GTGGCGCGGG AAAATCGACA GTGGGTCAAT TGCTGCTTGG TTTTTTAACA CCCACTGATG GCAAAATCCT GATCAACGGC ATGCCGCTCT CTAAGATTTC GCCACCTAGC TGGCACAAAC AGGTAGCCTG GTTACCGCAG AATCCAACAC TGTTTCACGG CACCATCGAA GATAACATTG CGCTGAATCG TCGTTCGAGC GGTCACGATG ATGCGTTGCA TCAGGCTGCG CAAAATGCAC AGGCACTCGA CTTCATCAAC CGCCTGCCAA ACGGGTTCCA GACGATTGTC GGGGATCGGG GCCAAGGGCT TTCGGGCGGT GAAATACAAC GCATTGCCTT GGCACGCGCA TTTTACAAGG ATGTGCCCGT TGTGCTGCTG GACGAACCTT CTGCCAGCCT TGACCCGGAA AGTGAGCGCC TGATCACGGA TGCCATCGCC AGACTATCCT CAGGTAGAAC CATGCTGACC ATCGCGCACC GATTGACCAC GATCGAGCGA AGCGATCAGA TCGTGGTACT CGACGGCGGG AAAATCATCG AGCAAGGGAC GCACGATGTT TTAATCCAGA CGAATGGTGC CTATGCAGAA CGCTACCGGC AATATCGGAG CGCCGGGCTA TGA
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Protein sequence | MANPAAMQDK EQIRQLDRWL RSQAKTVKRP LNTAVLLGSV NGFLLIAQCW MLAQVLNATA IGHQPITAVW GYLAGMIGLF LLRAGVNYGS QRFTFEAGAR LRTELRASIF DHIHALGPAW SRDQRSGARA TEVVDGVEAL DKYFSLYLPQ MQLAIIIPAA ILVFVFPFDW ISGLILSITA PLLPVFMIII GSQTEKLNQA QWQSLSRMGA HFFDMIEGLT TLKLFNAAQR EARFIGQIAE DYRLQTMKVL RVAFLSSMVL EFLAAISIAM VAVYVGFRLM YGDIHYLNGI FVLLLAPEFY LPLRSMGTQF HARMDALGAV EPIIELLNTQ PSTKPTGEIE LKPEHAPQIT FSHLDFAYPN RDAVISGLNL DLRAGTHTAL IGASGAGKST VGQLLLGFLT PTDGKILING MPLSKISPPS WHKQVAWLPQ NPTLFHGTIE DNIALNRRSS GHDDALHQAA QNAQALDFIN RLPNGFQTIV GDRGQGLSGG EIQRIALARA FYKDVPVVLL DEPSASLDPE SERLITDAIA RLSSGRTMLT IAHRLTTIER SDQIVVLDGG KIIEQGTHDV LIQTNGAYAE RYRQYRSAGL
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