| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1290 |
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| Symbol | |
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| ID | 8534444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 1395345 |
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| End bp | 1396406 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 646383680 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_003263172 |
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| Protein GI | 261855889 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGATT ACACGCACGA TCACGCACAA TCTCAAGAGA TCCTCCGTCT GGTTCTTATT
GAATTAAATG CATTAAATCT GCCCCCAAAC CCCATATTCT TCACCCTGTT CTACGAGCGT
GCGCTCAAGC GAGATGCCAG TCTTAACAAA GACATAGATG ATGCCATCAA CAGCGATAAG
GGACTTAGCG TTGATACTGC TCAGGAAATC TTCGACACGC ATGTTTTGAA CGGTGCGATC
AAGGAAATGA GCAAAGCGCA AAGCGCACTG CTGCGCGTGA TTCGAAACGT CATGATGCAA
ATGCTCAACA CAGGCAATGA GTTTTCGAAC TATGCGTCAT CCCTCGGTGA CTTTGTGCGC
AAAATTGATA GGACGGATTC GGTACAGGAT ATTCGGATGC TCACTGCCGA GGTGATCGAA
GATTCACGCC AACTTGAGCG CACGTCTAAA GAAACATCAT CGCAATTGAA CGATGCCGGA
GAGCAGATTA CCCGCCTGAA AGAAGAACTC GAAGCAGCCA GAAGGGATGC ACGCACCGAC
CCGCTGACCG GTCTGGCAAA TCGCCGCGGT CTCAATGAAC TGCTGCTGCA ACGCATCAAT
CTGTTCTTGC AGGAAAAGAC TCCTTTTTGC GTGATTCTGG CAGACATCGA CCACTTCAAA
CGCATCAATG ACTCGTATGG TCATCTGGTT GGCGACAAGA TATTGCGCTT CGTGGCACGC
ACCTTGATGG CCAACATCAA GGGTCAGGAC AGCGTCATCC GCTTCGGTGG TGAGGAATTT
GCGATCGTTC TGCCCTATAC GCAATACGAT GGGGGGATTA TCGTTGCTCA ACATCTGAGA
CAGAAAATTG CTTCATCGCG ACTCCGACTG GCCGAAAGCG GGCGTGATCT CGGCGGACTC
ACCATCTCCC TCGGAGTGGC AGCCGTTCAT ACGGATGACA CCCCCGATTC ACTCTTGCGC
CGCGCGGACG ATGCCTTGCT CAAAGCCAAG GCAGAGGGTC GTGATCGCGT GGTGGGCTTG
CCTTCTGAAA AACCCACGGG CGACGTAACT GAAATGCTTT GA
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| Protein sequence | MFDYTHDHAQ SQEILRLVLI ELNALNLPPN PIFFTLFYER ALKRDASLNK DIDDAINSDK
GLSVDTAQEI FDTHVLNGAI KEMSKAQSAL LRVIRNVMMQ MLNTGNEFSN YASSLGDFVR
KIDRTDSVQD IRMLTAEVIE DSRQLERTSK ETSSQLNDAG EQITRLKEEL EAARRDARTD
PLTGLANRRG LNELLLQRIN LFLQEKTPFC VILADIDHFK RINDSYGHLV GDKILRFVAR
TLMANIKGQD SVIRFGGEEF AIVLPYTQYD GGIIVAQHLR QKIASSRLRL AESGRDLGGL
TISLGVAAVH TDDTPDSLLR RADDALLKAK AEGRDRVVGL PSEKPTGDVT EML
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