| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1263 |
|---|
| Symbol | |
|---|
| ID | 8534417 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 1367594 |
|---|
| End bp | 1368607 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 646383654 |
|---|
| Product | lipoic acid synthetase |
|---|
| Protein accession | YP_003263146 |
|---|
| Protein GI | 261855863 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0320] Lipoate synthase |
|---|
| TIGRFAM ID | [TIGR00510] lipoate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.330421 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAAC AATCTCAATC CGAACGCGCC ACAATTCAGC TTAGCGCCGA AAAGCCGCTC
ACCTATTCGC CCCCGACACC GGAAATGCGT TCCGCCCAGA AAGTGTCGCG CATCCCGGTC
AAGATCGAAC CCACGAAGGA GATGCCACGC AAACCCGCAT GGATCCGTGC CAAGTCGCAG
GGTGGGGCAG AAGTTCAGCG GTTAAAAAAA GTTTTGCGTG ACCAGGGGTT GCATACGGTC
TGTGAAGAGG CCAATTGCCC GAACTTGGGT GAGTGCTTTG CGGGCGGAAC GGCTACATTC
ATGATTTTGG GTGATATTTG CACCCGTCGT TGCCCGTTTT GCGATGTGGC GCATGGCAAG
CCCCGCCCTG TGGATGCGGA AGAACCGGCT CGTCTGGCTG AAACAGTCGC GGCAATGGGG
TTGTCTTACG TCGTCATTAC CTCGGTCGAT CGGGACGATC TGCGTGATGG CGGGGCAGGG
CACTTCGCGG CCGTCATCCG TGCGCTGCGT TCTCGTTGTC CGAATCTCAC CATCGAAATT
CTTACCCCGG ACTTCCGTGG CCGAGAAGCG ATTGCACTCG ATATTCTGGC TGCAGACCCG
CCGGATGTGT TCAACCATAA CCTTGAAACC GTACCTGGGT TGTATCGTGC AGCACGGCCG
GGTGCGGATT ACATCGGGTC GCTGAACCTG CTTGCGGCGA TGAAGGAACG CTGTCCCGAT
GTACCGACCA AATCCGGCCT GATGCTGGGC TTGGGGGAAA CCGACGACCA ACTGCGGGAA
GTCTTGCGCG ACATGCGCGC CCGTAACATT GACATGTTGA CCTTGGGGCA ATACCTTCAG
CCCTCGCGCA ATCATTTGCC GGTTGACCGT TTTGTCACAC CCGAGCAATT TGCCGCGTTG
GGGCACGAAG CCGAAGCCAT GGGTTTCACC CATGTGGCCA GCGGCCCGAT GGTACGTTCG
TCATACCATG CCGATCAAGG CGGCTTGGCT GCCTTGGCTC AGGTGAGCGC ATGA
|
|---|
| Protein sequence | MSEQSQSERA TIQLSAEKPL TYSPPTPEMR SAQKVSRIPV KIEPTKEMPR KPAWIRAKSQ
GGAEVQRLKK VLRDQGLHTV CEEANCPNLG ECFAGGTATF MILGDICTRR CPFCDVAHGK
PRPVDAEEPA RLAETVAAMG LSYVVITSVD RDDLRDGGAG HFAAVIRALR SRCPNLTIEI
LTPDFRGREA IALDILAADP PDVFNHNLET VPGLYRAARP GADYIGSLNL LAAMKERCPD
VPTKSGLMLG LGETDDQLRE VLRDMRARNI DMLTLGQYLQ PSRNHLPVDR FVTPEQFAAL
GHEAEAMGFT HVASGPMVRS SYHADQGGLA ALAQVSA
|
|---|
| |