| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1260 |
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| Symbol | |
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| ID | 8534414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 1364203 |
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| End bp | 1365474 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 646383651 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_003263143 |
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| Protein GI | 261855860 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCGAAAT CCGCACCTTT TCAGGCACCA CCGGACACCC TGGACCGATT ACCGGTCAGC
GTTCTCATTC TGCTCAAAGA ACAGATCATC TATGCCAATC CTGCCGCCCT CTCTCTTTTA
CAGGCAGACG CCCCGGAACA GGTGCTAGGC CACAGCGTTG AAGATTTTCT TCATCCTCTA
GACTATCAAC GGGTCATGGC TCGGATTCGC CGGGCAGAAC GAACCCAGTT CACCAACCCG
CCCACCGAAT ATCGAATCTA CACCTGTACG CGTGAATTAC GAATCATTGG AATGATGAGT
ACGACGTACA TGATTGATGG TCAACCGGGC CTGCTTGCGG CCTTCATGGA CATGACCGAA
CGTTCCGTTA TTGAACAGCG GCTTCGCGAA TCGGACGAGC AGTTCCACCG CATGATGAAC
ACCATGCAGG ATGTTTTTTA TCGCACGGAT GCAGAAGGCA TAACCCGTTT TGTCTGCCCT
GCGGTCAAAG AAATACTTGG CTACACGGCA AGTGAAATCA TCGGACGGCC AGCCTCCGAT
TTTTATCCCA ACCCGCATGA TCGAGAAAAT CTTAAAAAGG CAATACTGGG ACATGGTTTT
GTTCGCGACT TCCCGGGTCA AATGCGGCGC AAGGATGGCC GCATTATCGA TATATCCATC
AGCAGCACAG TCATTCTGGA CGAAGAAGGC AAATATGCGG GCGTCGAGGG CATCTGGCGC
GACATTACCG AGCGAATGCA ACTCGAGCGC GAACTGGAGC GGCTTGCCAC CACTGATGAA
TTAACCGGCA TCGCTAATCG CCGCCAGATT CTCCAACAAC TGGATCACGC GTACAAACGC
TTCATCCGAC TGAATCACTC GCTCGTGGTG TTCATTCTTG ATTTGGACTT CTTCAAAAAC
GTAAACGACC AATATGGCCA TGTTTCAGGA GATATTCTGC TCAAGGAGTT CATCGCTCGG
GTTCAGCAGC AAATTCGGGA AATCGACTAC TTGGGGCGTT TAGGCGGGGA AGAATTTTTG
TTGATTCTGG ATGAAACCAG CAAAGAAACA GCCGAACAAA TAGGGCAACG TATCCTGCAG
GTCGTTCGGC AGACGCCATT CGATCTTGGC GCCGGAGTCA GCGTTACCAT AACTGTGAGC
ATTGGCGCCA CCTCTGCTTG CCACAAGGAT GCCAAGATAA CCGAACTACT CGAACATGCA
GATAAAGCAC TTTATGCGGC AAAAGACAGT GGACGTAACA AAATTTGCTG GTACTGCGAG
CAAACCAGCT GA
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| Protein sequence | MPKSAPFQAP PDTLDRLPVS VLILLKEQII YANPAALSLL QADAPEQVLG HSVEDFLHPL
DYQRVMARIR RAERTQFTNP PTEYRIYTCT RELRIIGMMS TTYMIDGQPG LLAAFMDMTE
RSVIEQRLRE SDEQFHRMMN TMQDVFYRTD AEGITRFVCP AVKEILGYTA SEIIGRPASD
FYPNPHDREN LKKAILGHGF VRDFPGQMRR KDGRIIDISI SSTVILDEEG KYAGVEGIWR
DITERMQLER ELERLATTDE LTGIANRRQI LQQLDHAYKR FIRLNHSLVV FILDLDFFKN
VNDQYGHVSG DILLKEFIAR VQQQIREIDY LGRLGGEEFL LILDETSKET AEQIGQRILQ
VVRQTPFDLG AGVSVTITVS IGATSACHKD AKITELLEHA DKALYAAKDS GRNKICWYCE
QTS
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