Gene Hneap_1256 details

Gene Information

• Locus tag: Hneap_1256
• ID: 8534410
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halothiobacillus neapolitanus c2
• Kingdom: Bacteria
• Replicon accession: NC_013422
• Strand: +
• Start bp: 1359422
• End bp: 1359832
• Gene Length: 411 bp
• Protein Length: 136 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 646383647
• Product: large conductance mechanosensitive channel protein
• Protein accession: YP_003263139
• Protein GI: 261855856
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1970] Large-conductance mechanosensitive channel
• TIGRFAM ID: [TIGR00220] large conductance mechanosensitive channel protein

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.00104806
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGTGA TTAAAGAGTT CAAAGAATTT GCCATGAAAG GCAACGTGAT TGATATGGCG 
GTCGGCATCA TCATCGGCGC TGCATTCGGG AAGATCGTAT CCTCATTGGT CAGCGATATC 
ATCATGCCAC CGATTGGTGT GCTGATCGGT GGCGTGGATT TCAGTAAACT AAATTTCGTT 
ATCCAGGCTG CACACGACAA GGTGCCCGAA GTTGCCATCC GCTACGGACA ATTCATTCAG 
ACGGCACTGG ACTTCACCAT CGTCGCCTTC GCCATTTTCA TGGCATTGAA AGTCATTAAT 
AAACTCAAGC GCCCTGAACC CGAGGCTAAA CCTGCAGAAC CAGCTGCACC TCCGGCAGAT 
GTCCAGCTAC TGACCGAAAT TCGTGATCTG TTGAAAAACA AGGCCGATTG A 

 

Protein sequence

MSVIKEFKEF AMKGNVIDMA VGIIIGAAFG KIVSSLVSDI IMPPIGVLIG GVDFSKLNFV 
IQAAHDKVPE VAIRYGQFIQ TALDFTIVAF AIFMALKVIN KLKRPEPEAK PAEPAAPPAD 
VQLLTEIRDL LKNKAD