| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1253 |
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| Symbol | |
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| ID | 8534407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1357377 |
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| End bp | 1358339 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 646383644 |
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| Product | sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_003263136 |
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| Protein GI | 261855853 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.171362 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGATC ATTCTTTGTT CACGCAGATT TGGACTCAAT CGCCCGTGTT CGAATCGGTC
CTGCGAAGCG TTCAAATTGT CGCTGCGACC GAGGCGACTA CCTTGATTCT TGGGGAATCA
GGTACCGGCA AGGAACTCGT TGCGCGTGCG TTGCATGACG GTTCCGGGCG TCGGGCTCGA
CCATACGTCG CAGTCAATTG CGCCAGCTTC TCTGAAGCTT TGGCAGAGTC GCAATTGTTT
GGCCATAAGC GGGGCGCGTT CACGGGCGCT CAGTGTGATT ATGATGGTCA AATTCGTTCG
GCTGATGGCG GGACACTTTT TCTTGATGAA ATAGCCGAGT TGAGTTTGCC TGTGCAAGCC
AAGTTGCTTC GTTTTCTGGA AACGGGTGAG GTGATGGGGC TGGGTGAATC TCAAAGCCGA
CGAGTCGATG TTCGTCTTGT GGCTGCGACA CACCGGGATT TGCTTCAGAT GGTTGAGCAG
GGGCTTTTCC GGGCTGATTT ATTCTATCGC CTTCAGGTCG TACCCATTGA ATTACCCCCA
CTTAGGATGC GTCAGGGTGA TATTGATTGG TTGCTGGCGC GATTCATGAA TGAGTTTGCC
GAACGGTACA CACTGCATAT GCCCCGGCTC ACCTCAAAGG CGCGTGGTGT GATCAGACGA
CATCCTTGGC CTGGAAACGT GCGTGAATTG CGTAATATGG CAGAACGCTT GGTTATCCTG
CACTCGGGCA AATCTGTTGA TGTAGATAAC CTCCCACATG AATTGCGTAG TCCTGATTCA
AGGGAAAACA CCACTCGCCG TTTCCATCTG CCGGAAAATG GCGTTGATCT CGAAGCCATC
GAGTCCGATT TGCTGCGTCA AGCGCTGCTG CGAACAGGTG GAAACAAGAG TAGAGCGGCT
CGATTATTGA ACTTGTCTCG CGACACCTTT CTTTATCGGC TCAAAAAGTT TTCTATTCAG
TAG
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| Protein sequence | MKDHSLFTQI WTQSPVFESV LRSVQIVAAT EATTLILGES GTGKELVARA LHDGSGRRAR
PYVAVNCASF SEALAESQLF GHKRGAFTGA QCDYDGQIRS ADGGTLFLDE IAELSLPVQA
KLLRFLETGE VMGLGESQSR RVDVRLVAAT HRDLLQMVEQ GLFRADLFYR LQVVPIELPP
LRMRQGDIDW LLARFMNEFA ERYTLHMPRL TSKARGVIRR HPWPGNVREL RNMAERLVIL
HSGKSVDVDN LPHELRSPDS RENTTRRFHL PENGVDLEAI ESDLLRQALL RTGGNKSRAA
RLLNLSRDTF LYRLKKFSIQ
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