Gene Hneap_1250 details

Gene Information

• Locus tag: Hneap_1250
• ID: 8534404
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halothiobacillus neapolitanus c2
• Kingdom: Bacteria
• Replicon accession: NC_013422
• Strand: +
• Start bp: 1355891
• End bp: 1356358
• Gene Length: 468 bp
• Protein Length: 155 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 646383641
• Product: rod shape-determining protein MreD
• Protein accession: YP_003263133
• Protein GI: 261855850
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2891] Cell shape-determining protein
• TIGRFAM ID: [TIGR03426] rod shape-determining protein MreD

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0249622
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCAATA AATGGGCGAT GATCCCGCTC AGCTTGCTGG TGGCTCTCAT CCTGACCGTT 
GAGCCCAGTG TGCCACTGTA TCAGCACTAT TCACCACAAT GGCTGCTGTT GACCGTTCTG 
TACTGGTGTA TTCGAGAACC AAATTCGGTT GGACTCATTG TCGCCTGGAT GTCTGGACTG 
GTTCTGGATG TTGCGAGCGT AGGATTACTA GGGGCGAATG CACTTTTGTT CACCCTAAGC 
GCGGCCGTGG TGCTCGGTTT AAGGCAGATG CTTTTCTTTA CCGGCCCTGT ACAGCAGGCA 
CTGTTCGTTG CTGGTTTGAG CGCTATCTAC TTGCTGTTGT CACTTTGGAT GCAGGGTGGA 
ATTTCCGACC TGACCATGCT TTTGCACAAT CTGGTACGCG TAGCGAGCAA TCTGGTTGCC 
TGGCCAATTA TCTTGATGGT TTTTCACCTG CTCCGCAGAC GATATTGA 

 

Protein sequence

MRNKWAMIPL SLLVALILTV EPSVPLYQHY SPQWLLLTVL YWCIREPNSV GLIVAWMSGL 
VLDVASVGLL GANALLFTLS AAVVLGLRQM LFFTGPVQQA LFVAGLSAIY LLLSLWMQGG 
ISDLTMLLHN LVRVASNLVA WPIILMVFHL LRRRY