| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1229 |
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| Symbol | |
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| ID | 8534383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1330410 |
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| End bp | 1332686 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 646383620 |
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| Product | DNA topoisomerase IV, A subunit |
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| Protein accession | YP_003263112 |
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| Protein GI | 261855829 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTCAG ATGAGTTTAA CCACGGCCCT GAAAATGGGC ACGGGATCGG CATGGGCGGA
AACAGCACCG ACGGTTTCGA GCGACGGTCG ATCGCCGAAT TCTCCGAGCA GGCTTATCTC
AACTACGCGA TGTATGTGAT TCTCGATCGT GCATTGCCGA GTGTGTGCGA TGGCCTCAAA
CCCGTGCAGC GGCGCATCGT TTATGCCATG AGCGAACTGG GCCTCACGGC GGCATCCAAG
CATAAGAAAT CGGCCAGAAC GGTCGGTGAT GTCATCGGCA AGTTTCATCC GCATGGCGAT
TCGGCCTGTT ACGAAGCGAT GGTGTTGATG GCGCAACCGT TTTCCTATCG TTATCCATTG
ATCGATGGTC AGGGCAACTT TGGTTCACCG GACGATCCCA AATCCTTCGC TGCGATGCGG
TACACCGAGT CTCGGTTGAC GGCCTACGCC CACAGCTTAT TGGCCGAAGC GGAGCAGGGC
ACAGTTGATT GGCAACCCAA CTTCGATGGC ACGCTGGAAG AACCCACGCT GCTGCCCGCG
CGTTTGCCGA ATGTATTACT TAATGGCGGC ATGGGAATCG CCGTTGGTTT GTCTACCGAT
ATCCCGCCGC ACAACCTGCG CGAAGTCGTT GCGGCCACCA TCGCGTTGCT GGATGAGCCG
GAGAGTACGG TGGATGATCT CTGTCGTCAT CTGCGCGGTC CGGACTTTCC CACCGAAGCG
GAAATCATCA CGCCACCGGA TGAAATCATG CAGATGTACC GTACCGGCAC GGGCTCGGTG
CGTCAGCGAG CGCGCTATGA AGTCGAACAG GGCGAAATAA TCATCACGGC GCTGCCGTTT
CAGGTGTCGG GCAGCAAGAT TCTCGAACAG ATCGCCGCCC AGATGAACGC AAAAAAACTC
CCGTTGGTGA CGGATCTGCG CGATGAATCC GACCATGAAG CGCCCACCCG CCTCGTGATT
ATTCCGCGAA GTCGACAGGT AGATGCCGAA GCCCTGATGG CACATTTGTT CGCGACCACC
GATCTTGAAA AGAGTTATCG CGTGAACATG AATGTGATCG CGCTCGATGG CCGTCCCAGA
GTGATGAACC TTAAAGACTT GCTCAGCGAA TGGTTGCAGT TCCGCCGCCA GACGCTGACT
CGCCGCATCC AGTGGCGTCT GGCGAAGGTG GAGAACCGCT TGGAGATTCT GGCGGGTTTG
CTGATTGCCT TCCTGAATAT CGATGAAGTC ATTGCCGTTA TTCGAGAGGC AGACGAGCCC
AAGGCCGAAT TGATCGCCCG CTTTGATCTT ACCGAACGTC AGGCCGAGGC GATTTTAGAA
ATTCGTTTGC GGCAACTGGC CAAACTCGAA GAAATCGCGA TCAAGAAAGA GCAGGGCGAA
TTGATGGCCG AGTCGGAGAT TCTGCGCGGC TTGCTGGCCG ATGAATCCCG CTTGCGTAAC
CTGCTGCGCG ACGAACTTCA GGACGATGCC CAAAAATACG GCGATGCGCG GCGTTCACGT
TTAGTCACGC GTGGTGCGGC ACAGGCGTTG GCAGAGACAG CACTCATTTC CAGTGAACCG
GTCACCGTCG TGTTGAGCAA GAATGGCTGG ATTCGTGCCG CCAAGGGGCA TGATGTCGAT
CCGGTTGCGT TGTCCTACAA GGCCGGTGAT GGGTATCTCG TCCACATGAA CGGCAAATCC
ACGCAGTCGG TCATCCTGCT CGACGATACC GGCCGGGCCT ACACGCTGGC TGCGCATAGC
CTCCCATCTG CGCGAGGGCA GGGCGAACCT TTGACTGGGC GGCTCAGCCC GCCAACCGGC
GCGCAATTCA ACCAAATGGT AATGGCCGAT GACAAGGATG CCGTTTTGTT ATGGCAAAGC
GGTGGCTATG GATTCATCAC ACCGTTTGAA GAATTGCTCA GTCGCCAGCG TGCCGGTAAG
GTCATGGTGA GCCTGCAAGA CGGCGCAACG CTCGGTGCGC CGATTCGCCT GGACGACCAG
GTTCAGCGCA TTGCCTTCGC ATCCAGTGAT GGTCACGTGC TGATCCTTGA ACGCGCCGAG
ATTCCGCAAC TCAGCAAGGG CCGTGGCAAC AAGCTGATGG GGTTGAAATC CGGCTTTACC
CTGATCGCCG CTTGCGCCTT GGTAGAAGGC GAGGGGCTCA AGGTTCAATC CGGTGCACGG
AGCGTGACCC TGCGTGATGT CGACTTTGAC AACTATGGTG GTGCACGCGC CAGCCGTGGC
CGCATCCTGC CGCGCGGTTT CCAGCGCGTC GATGCGCTTT TCCCTGCACA GGACTAA
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| Protein sequence | MSSDEFNHGP ENGHGIGMGG NSTDGFERRS IAEFSEQAYL NYAMYVILDR ALPSVCDGLK
PVQRRIVYAM SELGLTAASK HKKSARTVGD VIGKFHPHGD SACYEAMVLM AQPFSYRYPL
IDGQGNFGSP DDPKSFAAMR YTESRLTAYA HSLLAEAEQG TVDWQPNFDG TLEEPTLLPA
RLPNVLLNGG MGIAVGLSTD IPPHNLREVV AATIALLDEP ESTVDDLCRH LRGPDFPTEA
EIITPPDEIM QMYRTGTGSV RQRARYEVEQ GEIIITALPF QVSGSKILEQ IAAQMNAKKL
PLVTDLRDES DHEAPTRLVI IPRSRQVDAE ALMAHLFATT DLEKSYRVNM NVIALDGRPR
VMNLKDLLSE WLQFRRQTLT RRIQWRLAKV ENRLEILAGL LIAFLNIDEV IAVIREADEP
KAELIARFDL TERQAEAILE IRLRQLAKLE EIAIKKEQGE LMAESEILRG LLADESRLRN
LLRDELQDDA QKYGDARRSR LVTRGAAQAL AETALISSEP VTVVLSKNGW IRAAKGHDVD
PVALSYKAGD GYLVHMNGKS TQSVILLDDT GRAYTLAAHS LPSARGQGEP LTGRLSPPTG
AQFNQMVMAD DKDAVLLWQS GGYGFITPFE ELLSRQRAGK VMVSLQDGAT LGAPIRLDDQ
VQRIAFASSD GHVLILERAE IPQLSKGRGN KLMGLKSGFT LIAACALVEG EGLKVQSGAR
SVTLRDVDFD NYGGARASRG RILPRGFQRV DALFPAQD
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