Gene Hneap_1223 details

Gene Information

• Locus tag: Hneap_1223
• ID: 8534377
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halothiobacillus neapolitanus c2
• Kingdom: Bacteria
• Replicon accession: NC_013422
• Strand: -
• Start bp: 1324918
• End bp: 1325568
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 646383614
• Product: Ribonuclease H
• Protein accession: YP_003263106
• Protein GI: 261855823
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0164] Ribonuclease HII

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGCAAT TGCCACTGTT TGAGATGCAA ACGCCGGGAT TAATCTATGC GGGCGTAGAC 
GAGGCCGGAC GAGGCCCTCT GGCAGGCCCT GTTGTCGCCG CCGCCATCGT TTTGTATCCG 
GATGATCCGA TAGTCGGCGT GAACGATTCA AAAAAACTGA CCGAACGTCA ACGCGTCAAA 
TTGTTCGATG AAATAACTCG ACGTGCTCAA TCGTTCGCCA TTGCCGAAGC AACGGTACAT 
GAAATCGATA CGATAAATAT TCTTCAGGCT TCGCTTCTGG CCATGCGCCG CGCTGTTATG 
GCTGTATACG ATCAAATGAA AACACAAGGG CAAACGTTGG GACGCATTCA CGTCGATGGC 
AACCGCTGCC CGGATTTGAA CGACCCTGAT GCTGGATTTA TGGAATGCCA TGCCTTGATC 
GGTGGTGATG CTCGGGATGC GGCCATTGCC AGCGCCTCAA TTCTGGCAAA AGTAACCAGA 
GATCGACTTA TGCTGGACAT GGATAAGCTC TACCCGCAAT ACGAATTTGC GAAACACAAA 
GGCTATCCCA CGGCGCGACA TCGAGACTTG CTTATCGAGT TTGGTGCCTG CCCAGAACAT 
CGCTCAAGTT TTGCTCCAGT ACGGGCTATA TTGAGTCAAT CAAACCAATA A 

 

Protein sequence

MPQLPLFEMQ TPGLIYAGVD EAGRGPLAGP VVAAAIVLYP DDPIVGVNDS KKLTERQRVK 
LFDEITRRAQ SFAIAEATVH EIDTINILQA SLLAMRRAVM AVYDQMKTQG QTLGRIHVDG 
NRCPDLNDPD AGFMECHALI GGDARDAAIA SASILAKVTR DRLMLDMDKL YPQYEFAKHK 
GYPTARHRDL LIEFGACPEH RSSFAPVRAI LSQSNQ