Gene Hneap_1204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_1204 
Symbol 
ID8534357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp1308088 
End bp1308492 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content52% 
IMG OID646383594 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003263087 
Protein GI261855804 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTGAGA CCGAGAAGCA CATTCGTGGC TTGCTCCTTC GCAGCCTCGA CGGGGACGCG 
AAGGCGTATC AACTTTTTCT CAAGGAACTG GCGGGTTTAT TGCGCGGTTA TTTTCGTCGG
CGCCTGGCAT CCTTGCCCGA TGAAGTTGAA GACTTGGTGC AGGAATCCTT ACTGGCCATT
CACAATAAAC GCCATACCTA TGATCCAAAC CAACCCGCCA CGGCCTGGAT TTATGCCATT
GCCAAATACA AACTGATTGA TTTGCTCAGA CGGCACGAGC GTTACGACAA ACGAACTGAT
CCACTCGACG AGAACACGAC ACTGTTCACG CCATCTGAAG ACGAAGCGGC AGACGCCCGG
CGCGATATGG GGTCGTCTCA GAAAACGGAA AATAAAGCAC GCTAA
 
Protein sequence
MSETEKHIRG LLLRSLDGDA KAYQLFLKEL AGLLRGYFRR RLASLPDEVE DLVQESLLAI 
HNKRHTYDPN QPATAWIYAI AKYKLIDLLR RHERYDKRTD PLDENTTLFT PSEDEAADAR
RDMGSSQKTE NKAR